iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114627

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G056200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g004900	Sb10g004900.1	Sb10g004900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-06	28.7	327	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d  ++++G+ D+t+++WD+r
   Q: 327  GHLDYSFATAWhPDsQTFATGNQDKTCRIWDTR 359
           899*********99999**************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAASARDSAD AAERVVDDHD GWVSDGEMDV EMDVEGEFQD LDADRRDGGA DGDDEYLLLT 60
RIRDTSAAEA RAGKDIQGIP WERIHIARQD YRKARLEQYK NYENFPQSGE LMDKLCKQVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGA GCGCGCGGGA TAGCGCGGAT GCGGCGGAGC GAGTTGTCGA TGACCACGAC 60
GGTTGGGTGT CGGACGGCGA GATGGACGTG GAGATGGATG TGGAAGGCGA GTTCCAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_10g004900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047166	Hordeum vulgare	86.62	5.00e-157	545.00
IUUC-Kpa-049267	Komagataella pastoris	24.60	5.00e-30	124.00
IUUC-Sit-110330	Setaria italica	90.48	0.00e+00	780.00
IUUC-Sly-111458	Solanum lycopersicum	64.66	8.00e-161	558.00
IUUC-Stu-112477	Solanum tuberosum	66.50	1.00e-167	582.00
IUUC-Tca-121580	Theobroma cacao	67.38	8.00e-178	615.00
IUUC-Vvi-131274	Vitis vinifera	66.35	7.00e-170	589.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence