iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114803

UUCD1 version

UUC-SoB-00245

Ensembl Protein ID

Sb01g033510.1

UniProt Accession

A0A1B6QMT4; A0A1B6QMT4_SORBI

Genbank Protein ID

KXG39223.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G350100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g033510	Sb01g033510.1	Sb01g033510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.4	116	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f    ++ +++lp C H+fha C+ +w         + +CP+Cr
   Q: 116  CAVCLSAFddagEK-LRLLPgCSHLFHAACIDAW------LAAHVTCPVCR 159
           ******99555333.99999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDAGGGGGGG GGGGGRFTLT TSLLFVGLIV ALFVLGFFSS FLRRCSGADT NTARRGGAAL 60
AANAAVAAAA AAAFASAGGR RRAAGAGLDA AAMEALPVLT YATTRAVKAG RGALECAVCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCTG GCGGCGGCGG AGGCGGAGGA GGAGGAGGAG GGGGTAGGTT TACCCTCACC 60
ACCTCGCTCC TCTTCGTCGG TCTGATCGTC GCGCTCTTCG TGCTCGGCTT CTTCTCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014923	Brachypodium distachyon	58.92	4.00e-49	187.00
IUUC-Hvu-047543	Hordeum vulgare	62.42	5.00e-59	219.00
IUUC-Lpe-051384	Leersia perrieri	63.69	1.00e-39	156.00
IUUC-Oba-075634	Oryza barthii	79.66	8.00e-24	102.00
IUUC-Ogu-078082	Oryza glumaepatula	56.15	1.00e-63	236.00
IUUC-Oin-079295	Oryza indica	66.67	2.00e-39	154.00
IUUC-Ome-081896	Oryza meridionalis	59.73	5.00e-65	240.00
IUUC-Oni-082209	Oryza nivara	56.99	1.00e-63	236.00
IUUC-Opu-084170	Oryza punctata	60.20	1.00e-64	238.00
IUUC-Oru-084896	Oryza rufipogon	56.99	1.00e-64	239.00
IUUC-Osa-086135	Oryza sativa	62.55	5.00e-46	177.00
IUUC-Sit-109943	Setaria italica	69.26	1.00e-74	272.00
IUUC-Tae-125181	Triticum aestivum	60.43	3.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence