iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111401

Ensembl Protein ID

Solyc06g073680.2.1

UniProt Accession

K4C986; K4C986_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g073680.2	Solyc06g073680.2.1	Solyc06g073680.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-09	36.6	74	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.......sd..tllvsGsdDgtikvWD 29
           H +++t +++       sd   ll++G+ Dg++k+W 
   Q: 74   HDSWITTISWslfisdaSDplLLLATGCSDGSVKIWQ 110
           9*************9998855558************6 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLSSLIVAWS PCLPQTSGCG ISSANVLTSS CSVLAVGGKS GVLSLWRIHK PESYSIMNIP 60
DSNKTVLVGL LDAHDSWITT ISWSLFISDA SDPLLLLATG CSDGSVKIWQ ACCRRLVEST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGTCCT CACTCATTGT TGCATGGTCA CCCTGTCTGC CGCAGACATC TGGATGTGGT 60
ATATCTTCTG CTAATGTCTT GACCAGTAGC TGTTCTGTAC TTGCTGTTGG TGGGAAGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	44.47	2.00e-111	396.00
IUUC-Aly-005715	Arabidopsis lyrata	43.71	1.00e-127	450.00
IUUC-Ath-007637	Arabidopsis thaliana	44.68	8.00e-136	477.00
IUUC-Bdi-014902	Brachypodium distachyon	39.44	2.00e-113	402.00
IUUC-Bol-016169	Brassica oleracea	44.57	9.00e-134	469.00
IUUC-Bra-017736	Brassica rapa	44.75	8.00e-138	483.00
IUUC-Gma-044065	Glycine max	46.42	3.00e-143	501.00
IUUC-Hvu-047339	Hordeum vulgare	45.59	1.00e-06	43.50
IUUC-Mtr-058653	Medicago truncatula	45.72	5.00e-147	514.00
IUUC-Mac-065235	Musa acuminata	42.52	2.00e-126	446.00
IUUC-Ogl-077286	Oryza glaberrima	43.75	3.00e-83	302.00
IUUC-Oin-079863	Oryza indica	43.75	9.00e-84	304.00
IUUC-Oru-084242	Oryza rufipogon	34.90	2.00e-94	339.00
IUUC-Osa-085660	Oryza sativa	44.02	1.00e-83	303.00
IUUC-Ppa-095823	Physcomitrella patens	32.40	2.00e-83	302.00
IUUC-Pop-098900	Populus trichocarpa	48.99	3.00e-166	578.00
IUUC-Ppe-101763	Prunus persica	50.39	2.00e-162	565.00
IUUC-Smo-108757	Selaginella moellendorffii	30.23	1.00e-64	240.00
IUUC-Sit-110507	Setaria italica	38.70	4.00e-110	391.00
IUUC-Stu-112879	Solanum tuberosum	95.02	1.00e-125	442.00
IUUC-Tca-121440	Theobroma cacao	49.53	3.00e-162	565.00
IUUC-Tae-124422	Triticum aestivum	40.16	5.00e-112	398.00
IUUC-Vvi-131537	Vitis vinifera	53.90	5.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence