iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1222__AT4G29730.1	fgenesh2_kg.7__1222__AT4G29730.1	fgenesh2_kg.7__1222__AT4G29730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-26	90.7	317	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++ +c+++  +d +l+++Gs D+t++v+D
   Q: 317  HDADLHCVDWnpHDnNLILTGSADNTVRVFD 347
           9999*******9667**************** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MESEEAAATV QATRPRRVSR TPVTAILTKK RGRKPKKNDE SHSPFSQQQS QKATVDDKYS 60
QWKTLLPILY DSFVNHTLVW PSLSCRWGPQ LEQAASKTQR LYLSEQTNGS VPNTLVIANC 120

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Nucleotide Sequence
(Fasta)

AAAGAAGAAA ATGGAAAGCG AAGAAGCAGC AGCGACTGTT CAAGCCACCA GGCCGAGAAG 60
AGTATCTAGG ACTCCGGTGA CGGCCATTTT GACGAAGAAG AGAGGTCGGA AACCTAAGAA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0010629--P:negative regulation of gene expression

KEGG

aly:ARALYDRAFT_491789

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007602	Arabidopsis thaliana	91.13	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence