iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000406

Ensembl Protein ID

EMT04037

UniProt Accession

M8BLY9; M8BLY9_AEGTA

Genbank Protein ID

EMT04037.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD599551

Gene Name

F775_08133

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08133	EMT04037	EMT04037

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.3	234	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglk 33
           C iC+ +f++g  ++ lpC+H +h dC+++w +l+
   Q: 234  CVICRVEFEEGesLVALPCKHSYHSDCINQWLQLN 268
           ********77676999***************3332 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MEGPKGNGGE KHSADQNHSP NTPAAAGAGG AGSAAAAAAV GRRPFTALSQ EEADLALARV 60
LQEQERAYMM LSAHGGDGSE YDASDAGSYD YYDEEEEGIE GDEGSDYEEE GDEDEEVGEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGCC CCAAGGGAAA CGGCGGCGAG AAGCACAGCG CGGACCAAAA CCATAGCCCC 60
AATACTCCCG CCGCAGCCGG GGCCGGAGGG GCCGGGTCGG CCGCCGCGGC GGCCGCGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_08133

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002551	Amborella trichopoda	54.11	3.00e-56	210.00
IUUC-Aly-005825	Arabidopsis lyrata	50.61	2.00e-51	195.00
IUUC-Ath-007389	Arabidopsis thaliana	50.00	4.00e-51	194.00
IUUC-Bdi-014369	Brachypodium distachyon	83.56	2.00e-65	241.00
IUUC-Bol-016013	Brassica oleracea	52.61	2.00e-53	201.00
IUUC-Bra-017837	Brassica rapa	51.68	2.00e-51	195.00
IUUC-Gma-043972	Glycine max	62.33	8.00e-42	163.00
IUUC-Hvu-047198	Hordeum vulgare	87.27	3.00e-93	334.00
IUUC-Lpe-051234	Leersia perrieri	74.48	1.00e-57	215.00
IUUC-Mtr-058625	Medicago truncatula	61.49	4.00e-34	137.00
IUUC-Mac-065545	Musa acuminata	54.43	7.00e-60	223.00
IUUC-Oba-075053	Oryza barthii	72.90	2.00e-56	211.00
IUUC-Obr-076920	Oryza brachyantha	65.10	4.00e-78	283.00
IUUC-Ogl-077780	Oryza glaberrima	72.90	2.00e-56	211.00
IUUC-Ogu-078317	Oryza glumaepatula	70.19	1.00e-55	209.00
IUUC-Oin-079849	Oryza indica	73.68	9.00e-57	213.00
IUUC-Olo-080905	Oryza longistaminata	66.67	1.00e-42	167.00
IUUC-Ome-081728	Oryza meridionalis	74.00	2.00e-56	211.00
IUUC-Oni-082691	Oryza nivara	65.89	2.00e-41	161.00
IUUC-Opu-083391	Oryza punctata	64.37	6.00e-75	273.00
IUUC-Oru-085011	Oryza rufipogon	72.61	4.00e-56	211.00
IUUC-Osa-086147	Oryza sativa	72.61	4.00e-56	211.00
IUUC-Ppa-095451	Physcomitrella patens	47.45	1.00e-49	189.00
IUUC-Pop-099843	Populus trichocarpa	62.77	1.00e-34	139.00
IUUC-Ppe-102055	Prunus persica	65.07	4.00e-51	194.00
IUUC-Smo-108692	Selaginella moellendorffii	58.70	2.00e-29	119.00
IUUC-Sit-110594	Setaria italica	69.96	5.00e-76	276.00
IUUC-Sly-111461	Solanum lycopersicum	53.09	8.00e-21	92.40
IUUC-Sbi-113812	Sorghum bicolor	64.85	1.00e-73	269.00
IUUC-Tca-121858	Theobroma cacao	60.96	2.00e-41	162.00
IUUC-Tae-125531	Triticum aestivum	96.68	6.00e-101	359.00
IUUC-Tur-126249	Triticum urartu	93.24	2.00e-68	251.00
IUUC-Vvi-131462	Vitis vinifera	51.97	2.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence