iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114721

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G291900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g032320	Sb02g032320.1	Sb02g032320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-08	33.9	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+++vlp CgH+fha C+  w         + +CP Cr
   Q: 119  CAICLAEFarGDEVRVLPpCGHAFHAACVDTW------LLCTSTCPSCR 161
           ********66444999999*************......666677****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRDLQAGTVV EHLAGVAAAA TAPSSASAGG GVHTDTFLIL AAVLCFLLCV VGLAFVARCS 60
RLCNPSSYSV DADDAAAAMP AEAGAAPQCK GIEKDALEKL PTVPFEAAGH DDVDERPECA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGGACC TGCAGGCCGG TACCGTCGTC GAGCACCTGG CCGGGGTGGC CGCCGCGGCC 60
ACGGCGCCGT CGTCGGCGTC GGCGGGGGGC GGCGTCCACA CGGACACGTT CCTCATCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g032320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	65.69	1.00e-25	108.00
IUUC-Bdi-014381	Brachypodium distachyon	69.29	6.00e-28	115.00
IUUC-Hvu-047055	Hordeum vulgare	69.57	9.00e-43	164.00
IUUC-Lpe-051329	Leersia perrieri	63.70	3.00e-29	120.00
IUUC-Oba-075557	Oryza barthii	69.78	8.00e-32	129.00
IUUC-Obr-076338	Oryza brachyantha	71.54	5.00e-41	159.00
IUUC-Ogl-077066	Oryza glaberrima	69.78	8.00e-32	129.00
IUUC-Ogu-078393	Oryza glumaepatula	69.78	8.00e-32	129.00
IUUC-Oin-079740	Oryza indica	69.78	8.00e-32	129.00
IUUC-Ome-081495	Oryza meridionalis	69.29	1.00e-31	128.00
IUUC-Oni-082487	Oryza nivara	69.78	8.00e-32	129.00
IUUC-Oru-084841	Oryza rufipogon	69.78	8.00e-32	129.00
IUUC-Osa-085975	Oryza sativa	69.78	8.00e-32	129.00
IUUC-Sit-110685	Setaria italica	71.51	6.00e-36	142.00
IUUC-Tae-123834	Triticum aestivum	69.78	4.00e-34	136.00
IUUC-Tur-126504	Triticum urartu	68.49	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence