iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000746

Ensembl Protein ID

EMT23411

UniProt Accession

M8CJ93; M8CJ93_AEGTA

Genbank Protein ID

EMT23411.1

Protein Name

Putative RING-H2 finger protein ATL2C

Genbank Nucleotide ID

KD520227

Gene Name

F775_16342

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_16342	EMT23411	EMT23411

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.0	3	34

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 10   dgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           d +++lp CgH+fh  C+ +w         + +CPlCr
   Q: 3    DALRLLPtCGHAFHVPCIDAW------LLSHSTCPLCR 34
           55788999*************......89999*****8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MDDALRLLPT CGHAFHVPCI DAWLLSHSTC PLCRGSVLDL SPASSPVVLV LESDGRADTA 60
AEALGGRDDH ENEASPKAEE VVEVKLGKLR CMDGSNGGSG HLAADQTAGR DDLGRRRCLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG CGCTCCGGCT GCTGCCCACC TGCGGCCACG CCTTCCACGT GCCCTGCATC 60
GACGCCTGGC TGCTCTCGCA CTCCACCTGC CCGCTCTGCC GCGGCAGCGT CCTCGACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_16342

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014076	Brachypodium distachyon	63.92	3.00e-47	181.00
IUUC-Bol-016576	Brassica oleracea	36.16	6.00e-33	134.00
IUUC-Bra-017334	Brassica rapa	34.39	3.00e-31	128.00
IUUC-Gma-043592	Glycine max	37.33	1.00e-31	130.00
IUUC-Hvu-047490	Hordeum vulgare	90.24	5.00e-127	446.00
IUUC-Lpe-050872	Leersia perrieri	46.73	2.00e-46	179.00
IUUC-Mtr-058782	Medicago truncatula	35.41	3.00e-32	132.00
IUUC-Oba-075614	Oryza barthii	55.59	1.00e-50	193.00
IUUC-Obr-076645	Oryza brachyantha	48.66	2.00e-47	182.00
IUUC-Ogl-077890	Oryza glaberrima	55.59	1.00e-50	193.00
IUUC-Ogu-078460	Oryza glumaepatula	56.07	2.00e-48	186.00
IUUC-Oin-079735	Oryza indica	56.07	5.00e-48	184.00
IUUC-Ome-081603	Oryza meridionalis	54.64	9.00e-46	177.00
IUUC-Oni-082407	Oryza nivara	56.07	5.00e-48	184.00
IUUC-Opu-083776	Oryza punctata	53.09	1.00e-53	202.00
IUUC-Oru-084303	Oryza rufipogon	56.07	4.00e-48	184.00
IUUC-Osa-085748	Oryza sativa	56.07	7.00e-48	184.00
IUUC-Ppe-101557	Prunus persica	37.50	1.00e-37	150.00
IUUC-Sit-110194	Setaria italica	57.46	3.00e-55	208.00
IUUC-Sbi-114154	Sorghum bicolor	49.52	7.00e-48	184.00
IUUC-Tae-123795	Triticum aestivum	98.99	5.00e-144	503.00
IUUC-Vvi-130906	Vitis vinifera	37.13	4.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence