iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1807__AT2G37520.1	fgenesh2_kg.4__1807__AT2G37520.1	fgenesh2_kg.4__1807__AT2G37520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.80e-11	44.7	499	541

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +Cg+gg+    l+ C  C ++fH aClk +   ++p+ + w+C++C+
   Q: 499  DMCSICGDGGD----LLLCAGCPQAFHTACLKFQ---SVPEGT-WYCSSCN 541
           79*********....*******************...*****6.******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGEGTICLEM PMEENSSMGQ FKRERLDESN KGDHFPNKKQ AKEASNDDIT SEISNPVASP 60
VESTSLFRDV SSQPVKSGLG ECSGSDFGSE ETVSDDASVA GSSQTEQSSD VLPSRFVLEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATCTAACT CAAGTTAGTG TTAAGTGTTG TGTCTATTGT ATGCAATCGT GTTGTGATAT 60
TGAATCTATT TCTGATGGGA GAAGGAACTA TTTGTTTGGA GATGCCAATG GAAGAGAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR032308--Jas
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF16135--Jas
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_482747

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007521	Arabidopsis thaliana	90.16	0.00e+00	1492.00
IUUC-Bci-013740	Botrytis cinerea	23.49	1.00e-07	51.20
IUUC-Bol-016318	Brassica oleracea	79.37	0.00e+00	1257.00
IUUC-Bra-017162	Brassica rapa	76.15	0.00e+00	1182.00
IUUC-Gma-043820	Glycine max	54.81	0.00e+00	923.00
IUUC-Hvu-047802	Hordeum vulgare	43.86	3.00e-115	409.00
IUUC-Lpe-050827	Leersia perrieri	40.25	6.00e-150	524.00
IUUC-Mtr-058688	Medicago truncatula	62.10	0.00e+00	837.00
IUUC-Obr-076448	Oryza brachyantha	43.80	3.00e-115	409.00
IUUC-Oin-079045	Oryza indica	42.56	1.00e-96	347.00
IUUC-Olo-080735	Oryza longistaminata	40.86	8.00e-94	338.00
IUUC-Pop-099262	Populus trichocarpa	42.03	9.00e-147	513.00
IUUC-Sly-110901	Solanum lycopersicum	53.29	0.00e+00	879.00
IUUC-Stu-112535	Solanum tuberosum	63.69	0.00e+00	659.00
IUUC-Tca-121723	Theobroma cacao	58.53	0.00e+00	882.00
IUUC-Vvi-131745	Vitis vinifera	53.27	0.00e+00	881.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence