iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114621

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G057700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g004920	Sb03g004920.1	Sb03g004920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-12	46.9	305	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDlrtg 33
           gHt+ v+c+af      +++lvsG++D ++k+WD+++g
   Q: 305  GHTAAVSCVAFsvfgeKGKFLVSGGNDASVKLWDWSKG 342
           8************9754499**************9766 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSETESAAVA AALDPAATAE PKPRRLRGHK KGAVTCCVAS SARPGVVASS GEDGCLCWFD 60
LRTKDVLLTM EAANKPISSI CFKPGNEDCV YISAGNEILS FDVRMGAQSK PLETYNYNRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGATAGCCA TGTCGGAGAC TGAATCGGCG GCAGTGGCCG CGGCGCTGGA CCCGGCGGCT 60
ACAGCGGAGC CGAAGCCTCG GCGGCTGCGG GGGCACAAGA AGGGCGCCGT CACCTGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_03g004920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	85.75	3.00e-173	600.00
IUUC-Aml-001203	Ailuropoda melanoleuca	26.50	1.00e-27	116.00
IUUC-Atr-002680	Amborella trichopoda	58.20	2.00e-97	348.00
IUUC-Apl-003656	Anas platyrhynchos	28.71	4.00e-25	107.00
IUUC-Aca-004987	Anolis carolinensis	29.15	8.00e-26	110.00
IUUC-Aly-006254	Arabidopsis lyrata	55.08	3.00e-111	394.00
IUUC-Ath-006632	Arabidopsis thaliana	55.08	9.00e-111	392.00
IUUC-Ame-011032	Astyanax mexicanus	26.56	1.00e-24	106.00
IUUC-Bta-012588	Bos taurus	28.30	2.00e-28	118.00
IUUC-Bdi-014532	Brachypodium distachyon	89.70	0.00e+00	646.00
IUUC-Bol-015542	Brassica oleracea	53.12	1.00e-98	353.00
IUUC-Bra-017046	Brassica rapa	57.78	3.00e-109	389.00
IUUC-Cja-019365	Callithrix jacchus	27.08	7.00e-27	114.00
IUUC-Cfa-021090	Canis familiaris	26.25	2.00e-26	112.00
IUUC-Cpo-021517	Cavia porcellus	26.72	2.00e-24	105.00
IUUC-Csa-023041	Chlorocebus sabaeus	26.70	4.00e-26	111.00
IUUC-Cho-024801	Choloepus hoffmanni	26.46	4.00e-27	114.00
IUUC-Dre-028437	Danio rerio	25.48	8.00e-18	83.60
IUUC-Dno-029267	Dasypus novemcinctus	27.01	5.00e-26	110.00
IUUC-Ete-032726	Echinops telfairi	21.41	1.00e-07	50.10
IUUC-Eca-033621	Equus caballus	27.02	1.00e-26	112.00
IUUC-Eeu-034461	Erinaceus europaeus	30.77	5.00e-26	110.00
IUUC-Fca-036410	Felis catus	26.50	6.00e-26	110.00
IUUC-Fal-036676	Ficedula albicollis	28.68	2.00e-26	112.00
IUUC-Gac-041905	Gasterosteus aculeatus	27.51	7.00e-27	113.00
IUUC-Gma-044017	Glycine max	52.96	7.00e-98	349.00
IUUC-Ggo-044881	Gorilla gorilla	26.70	3.00e-25	108.00
IUUC-Hsa-046836	Homo sapiens	26.70	8.00e-26	110.00
IUUC-Hvu-047651	Hordeum vulgare	86.67	0.00e+00	652.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	27.84	6.00e-28	117.00
IUUC-Lch-050406	Latimeria chalumnae	25.99	1.00e-19	89.70
IUUC-Lpe-051023	Leersia perrieri	71.70	1.00e-155	541.00
IUUC-Loc-052878	Lepisosteus oculatus	27.68	8.00e-30	123.00
IUUC-Laf-053547	Loxodonta africana	28.92	5.00e-24	104.00
IUUC-Mcc-054646	Macaca mulatta	26.45	2.00e-25	108.00
IUUC-Meu-056381	Macropus eugenii	27.86	4.00e-23	101.00
IUUC-Mtr-058656	Medicago truncatula	51.83	1.00e-98	352.00
IUUC-Mmr-061601	Microcebus murinus	27.27	7.00e-29	120.00
IUUC-Mdo-062305	Monodelphis domestica	25.76	1.00e-23	103.00
IUUC-Mmu-063213	Mus musculus	26.44	3.00e-24	104.00
IUUC-Mac-064940	Musa acuminata	60.32	7.00e-132	462.00
IUUC-Mpu-066629	Mustela putorius furo	25.81	1.00e-26	113.00
IUUC-Nle-069860	Nomascus leucogenys	26.95	2.00e-26	112.00
IUUC-Opr-071180	Ochotona princeps	25.95	4.00e-18	84.70
IUUC-Ont-071912	Oreochromis niloticus	28.71	1.00e-25	109.00
IUUC-Ocu-074874	Oryctolagus cuniculus	27.71	3.00e-27	115.00
IUUC-Oba-075815	Oryza barthii	77.81	1.00e-155	541.00
IUUC-Obr-076835	Oryza brachyantha	84.11	6.00e-146	509.00
IUUC-Ogu-077977	Oryza glumaepatula	75.94	1.00e-151	528.00
IUUC-Oin-079206	Oryza indica	82.82	1.00e-179	621.00
IUUC-Olo-080621	Oryza longistaminata	77.30	1.00e-152	531.00
IUUC-Ome-081261	Oryza meridionalis	76.69	1.00e-151	528.00
IUUC-Oni-082280	Oryza nivara	71.29	7.00e-69	253.00
IUUC-Opu-083256	Oryza punctata	77.81	1.00e-154	538.00
IUUC-Oru-084531	Oryza rufipogon	71.00	5.00e-134	469.00
IUUC-Osa-085892	Oryza sativa	82.82	1.00e-179	621.00
IUUC-Ola-086701	Oryzias latipes	29.56	3.00e-24	105.00
IUUC-Olu-087593	Ostreococcus lucimarinus	26.41	3.00e-12	65.50
IUUC-Oga-088152	Otolemur garnettii	27.08	6.00e-28	117.00
IUUC-Oar-089681	Ovis aries	26.74	1.00e-27	116.00
IUUC-Ptr-091142	Pan troglodytes	26.70	1.00e-25	109.00
IUUC-Pan-092435	Papio anubis	26.51	6.00e-25	107.00
IUUC-Psi-093255	Pelodiscus sinensis	27.59	2.00e-25	108.00
IUUC-Ppa-095829	Physcomitrella patens	42.11	5.00e-71	260.00
IUUC-Pfo-097339	Poecilia formosa	28.39	1.00e-24	106.00
IUUC-Pab-098274	Pongo abelii	26.95	4.00e-25	107.00
IUUC-Pop-099705	Populus trichocarpa	51.72	3.00e-99	353.00
IUUC-Pca-100451	Procavia capensis	28.92	2.00e-23	102.00
IUUC-Ppe-101220	Prunus persica	57.75	1.00e-123	435.00
IUUC-Pva-102385	Pteropus vampyrus	25.79	5.00e-27	114.00
IUUC-Rno-105765	Rattus norvegicus	26.45	2.00e-24	105.00
IUUC-Sha-106533	Sarcophilus harrisii	27.30	2.00e-26	112.00
IUUC-Smo-109248	Selaginella moellendorffii	40.32	2.00e-67	248.00
IUUC-Sit-110297	Setaria italica	91.99	7.00e-148	515.00
IUUC-Sly-111617	Solanum lycopersicum	57.60	4.00e-113	400.00
IUUC-Stu-112531	Solanum tuberosum	57.33	3.00e-113	400.00
IUUC-Sar-113647	Sorex araneus	26.63	9.00e-27	113.00
IUUC-Tgu-116482	Taeniopygia guttata	26.79	5.00e-19	87.80
IUUC-Tru-118622	Takifugu rubripes	25.06	3.00e-21	95.10
IUUC-Tsy-119474	Tarsius syrichta	26.94	9.00e-24	103.00
IUUC-Tni-120250	Tetraodon nigroviridis	23.57	1.00e-13	69.70
IUUC-Tca-121583	Theobroma cacao	56.99	2.00e-121	427.00
IUUC-Tae-124680	Triticum aestivum	90.24	0.00e+00	654.00
IUUC-Tur-126076	Triticum urartu	77.52	2.00e-160	557.00
IUUC-Tbe-127545	Tupaia belangeri	26.58	1.00e-26	112.00
IUUC-Ttr-128497	Tursiops truncatus	25.89	1.00e-25	109.00
IUUC-Vpa-130772	Vicugna pacos	25.50	6.00e-26	110.00
IUUC-Vvi-131632	Vitis vinifera	58.82	2.00e-127	447.00
IUUC-Xma-133432	Xiphophorus maculatus	28.08	1.00e-24	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence