iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043218

Ensembl Protein ID

GLYMA08G05640.1

UniProt Accession

I1KQI6; I1KQI6_SOYBN

Genbank Protein ID

KRH41795.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841

Gene Name

LOC100794702; GLYMA_08G051900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G05640	GLYMA08G05640.1	GLYMA08G05640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-33	113.1	232	267
UBD/Beta-Prp	1.70e-61	209.7	55	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+s++++++ +d + +++ s D++ kvWD+++g+
   Q: 232  GHTGSIYAVSWsPDgKQVLTVSADKSAKVWDITEGN 267
           8***********999****************99885 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD...rtikvwdlstgkcvhtlkgheds 96
           g+h  + t+  fsp+++++a++ ++gt+++w +++  +l++     +a + ++++spdg  +v ++e     +++ +  ++g+ v  + gh+++
   Q: 55   GDHAYPATVARFSPNGEWVASADASGTVRIWGTRNDFVLKKEfRVLSARIDDLQWSPDGLRIVACGEGkgkSFVRAFMWDSGTNVGEFDGHSRR 148
           7889999****************************99877665*************************9999********************** PP
   S: 97   vlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvysls 187
           vls+++ p++  ++v+ ++d  ++ ++ +         + h+ +vncv+++pdg+ ++s s D++  ++d k+++ + +l  +gght+s+y +s
   Q: 149  VLSCAYKPTRpFRVVTCGEDFLVNFYEGPPFRFKL-SHRDHSNFVNCVRYSPDGSKFISVSSDKKGVIFDGKSAEKIGELssEGGHTGSIYAVS 241
           ********99789***************9999999.9*******************************************99999********* PP
   S: 188  fdsngkelvsgsldgtvklwdlq...tgecvrtlng 220
           ++++gk+++++s d++ k+wd+    +g++ +tl++
   Q: 242  WSPDGKQVLTVSADKSAKVWDITegnNGKVKKTLTC 277
           ***********************8888888777776 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSHELLETYA CMPTTERGRG ILISGDAKSN SVVYTNGRSV VMMNLQNPLH VSVYGDHAYP 60
ATVARFSPNG EWVASADASG TVRIWGTRND FVLKKEFRVL SARIDDLQWS PDGLRIVACG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATTAACA TAAGATGTTA AAGGTGCGAG CCAGTGTGGT GTCTTGTGCT GTCTAATAGA 60
GCTTGGTCGG TTACCATCGT GCTCTGCAGT CTGCACCTCT CTTTTTCTCT CTCACTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042643--C:actomyosin, actin portion
GO:0030864--C:cortical actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030042--P:actin filament depolymerization
GO:0030836--P:positive regulation of actin filament depolymerization

KEGG

gmx:100794702

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	68.28	0.00e+00	748.00
IUUC-Atr-003160	Amborella trichopoda	75.29	0.00e+00	972.00
IUUC-Aca-004707	Anolis carolinensis	36.54	8.00e-111	394.00
IUUC-Aly-006465	Arabidopsis lyrata	76.11	0.00e+00	958.00
IUUC-Ath-006740	Arabidopsis thaliana	75.78	0.00e+00	956.00
IUUC-Ago-007920	Ashbya gossypii	29.46	4.00e-65	242.00
IUUC-Bdi-014659	Brachypodium distachyon	66.78	0.00e+00	867.00
IUUC-Bra-017139	Brassica rapa	75.91	0.00e+00	962.00
IUUC-Cel-018417	Caenorhabditis elegans	33.50	1.00e-89	323.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	32.74	2.00e-83	303.00
IUUC-Fox-037924	Fusarium oxysporum	33.83	1.00e-88	320.00
IUUC-Gac-042363	Gasterosteus aculeatus	37.28	7.00e-113	400.00
IUUC-Hvu-047517	Hordeum vulgare	67.93	0.00e+00	902.00
IUUC-Mtr-057922	Medicago truncatula	89.46	0.00e+00	1129.00
IUUC-Mvi-060448	Microbotryum violaceum	30.26	2.00e-67	250.00
IUUC-Mac-065124	Musa acuminata	75.08	0.00e+00	974.00
IUUC-Ont-071666	Oreochromis niloticus	37.66	1.00e-109	390.00
IUUC-Obr-076364	Oryza brachyantha	70.35	0.00e+00	925.00
IUUC-Pma-094396	Petromyzon marinus	36.10	3.00e-110	392.00
IUUC-Pno-095086	Phaeosphaeria nodorum	33.23	4.00e-86	312.00
IUUC-Pop-098850	Populus trichocarpa	80.69	0.00e+00	1036.00
IUUC-Ppe-101578	Prunus persica	81.68	0.00e+00	1055.00
IUUC-Sha-107084	Sarcophilus harrisii	36.06	5.00e-90	325.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	33.82	1.00e-93	337.00
IUUC-Spo-108309	Schizosaccharomyces pombe	33.88	7.00e-87	314.00
IUUC-Smo-109255	Selaginella moellendorffii	52.79	0.00e+00	649.00
IUUC-Sly-110897	Solanum lycopersicum	79.37	0.00e+00	1021.00
IUUC-Stu-111971	Solanum tuberosum	79.37	0.00e+00	1021.00
IUUC-Tca-121609	Theobroma cacao	79.39	0.00e+00	1026.00
IUUC-Tre-122076	Trichoderma reesei	31.36	2.00e-77	283.00
IUUC-Tvi-122528	Trichoderma virens	32.35	1.00e-84	307.00
IUUC-Tae-124549	Triticum aestivum	67.93	0.00e+00	904.00
IUUC-Tur-126845	Triticum urartu	63.08	0.00e+00	728.00
IUUC-Ttr-128898	Tursiops truncatus	33.93	4.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence