iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000594

Ensembl Protein ID

EMT23495

UniProt Accession

M8BEX4; M8BEX4_AEGTA

Genbank Protein ID

EMT23495.1

Protein Name

RING-H2 finger protein ATL5J

Genbank Nucleotide ID

KD519948

Gene Name

F775_14796

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_14796	EMT23495	EMT23495

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-10	40.3	85	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +   + ++vlp C+++fh+dC+ +w         + rCP+C+
   Q: 85   CPICLDAMepGRAVRVLPgCNRAFHQDCVDRW------LAISPRCPVCN 127
           ******8866555*******************......**********7 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAQVWAVFLA VGSLAIGMLG VLGVWLCYLF QAVAFGPPPA PPPETPETVD DDDDKNGLSE 60
AELRQLGGVV QAATANGEEE EEVLCPICLD AMEPGRAVRV LPGCNRAFHQ DCVDRWLAIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGG TCTGGGCGGT GTTCCTGGCC GTGGGGTCGC TCGCCATCGG CATGCTCGGG 60
GTGCTCGGCG TCTGGCTCTG CTACCTGTTC CAGGCCGTGG CGTTTGGCCC GCCCCCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_14796

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014807	Brachypodium distachyon	80.54	7.00e-50	188.00
IUUC-Csv-025845	Ciona savignyi	36.84	1.00e-08	51.60
IUUC-Gma-042987	Glycine max	35.94	2.00e-15	73.60
IUUC-Hvu-047412	Hordeum vulgare	89.83	2.00e-28	115.00
IUUC-Lpe-051097	Leersia perrieri	66.67	4.00e-36	142.00
IUUC-Mtr-058722	Medicago truncatula	31.50	6.00e-14	68.90
IUUC-Oba-075278	Oryza barthii	56.52	1.00e-19	87.40
IUUC-Obr-076543	Oryza brachyantha	68.24	2.00e-48	183.00
IUUC-Ogl-077656	Oryza glaberrima	70.77	1.00e-40	158.00
IUUC-Ogu-078471	Oryza glumaepatula	70.23	2.00e-39	154.00
IUUC-Oin-079493	Oryza indica	69.47	1.00e-38	151.00
IUUC-Olo-080661	Oryza longistaminata	74.78	1.00e-36	144.00
IUUC-Ome-081899	Oryza meridionalis	72.66	2.00e-41	160.00
IUUC-Oni-082549	Oryza nivara	70.23	2.00e-39	154.00
IUUC-Opu-083427	Oryza punctata	74.80	6.00e-46	175.00
IUUC-Oru-084437	Oryza rufipogon	70.23	2.00e-39	154.00
IUUC-Osa-085580	Oryza sativa	68.03	1.00e-43	167.00
IUUC-Sit-109718	Setaria italica	70.00	5.00e-37	145.00
IUUC-Sly-111161	Solanum lycopersicum	33.88	1.00e-14	71.20
IUUC-Stu-112592	Solanum tuberosum	33.88	3.00e-14	70.10
IUUC-Sbi-114335	Sorghum bicolor	73.33	3.00e-37	146.00
IUUC-Tae-124650	Triticum aestivum	100.00	9.00e-72	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence