iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G22580	BRADI3G22580.1	BRADI3G22580.1
BRADI3G22580	BRADI3G22580.2	BRADI3G22580.2
BRADI3G22580	BRADI3G22580.3	BRADI3G22580.3
BRADI3G22580	BRADI3G22580.4	BRADI3G22580.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	31.94	5.90e-02	33.90	IUUC-Sce-106134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MTPPATVSPG PVGPALVHPA RVRVLHPGQP TAGARPGPVV YWMLRDQRLV DNWALLHAAS 60
LAAAAAAPLA IAFSLFPKPF LLSARRRQLG FLLRGLRRLA ADAAARRLPF FLLIGGPTEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGGAAACA TGACCCAACT GGCCAACTGC CCCAGCCTTC CTACACCGAG CGCAGGCGGG 60
GATCAAACGC GCACCTCCAT TTCCTCCCTC TCCCCTGTAG CCCCGTCCAC GCCGTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR005101--Cryptochr/Photolyase_FAD-bd
IPR008148--DNA_photolyase_2
IPR032673--DNA_photolyase_2_CS
IPR006050--DNA_photolyase_N
IPR014729--Rossmann-like_a/b/a_fold

PROSITE

PS01083--DNA_PHOTOLYASES_2_1
PS01084--DNA_PHOTOLYASES_2_2
PS51645--PHR_CRY_ALPHA_BETA

Pfam

PF00875--DNA_photolyase

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0003904--F:deoxyribodipyrimidine photo-lyase activity
GO:0000719--P:photoreactive repair
GO:0009650--P:UV protection

KEGG

bdi:100838499

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004359	Anolis carolinensis	51.09	2.00e-121	428.00
IUUC-Hvu-047181	Hordeum vulgare	88.46	3.00e-169	586.00
IUUC-Mga-059392	Meleagris gallopavo	52.62	1.00e-109	389.00
IUUC-Ola-086826	Oryzias latipes	51.35	7.00e-116	410.00
IUUC-Sce-106134	Saccharomyces cerevisiae	31.94	1.40e-02	33.90
IUUC-Sit-109714	Setaria italica	87.76	0.00e+00	706.00
IUUC-Sly-111545	Solanum lycopersicum	63.27	6.00e-175	606.00
IUUC-Stu-112042	Solanum tuberosum	63.27	8.00e-176	608.00
IUUC-Tni-120579	Tetraodon nigroviridis	50.79	2.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence