iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005931

UUCD1 version

UUC-ArL-01032

Ensembl Protein ID

fgenesh2_kg.6__533__AT5G05970.1

UniProt Accession

D7LZ27; D7LZ27_ARALL

Genbank Protein ID

EFH47451.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

NEDD1; ARALYDRAFT_487399

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__533__AT5G05970.1	fgenesh2_kg.6__533__AT5G05970.1	fgenesh2_kg.6__533__AT5G05970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-22	77.2	185	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f..sd.tllvsGsdDgtikvWDl 30
           +  s+ +ll++++dDgt+++WD+
   Q: 185  YsrSSrHLLLTAGDDGTVHLWDT 207
           465556889*************6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSNLVEPSWR LLAASGGDTV KLFDVSADSG DPCVLSYTPT PGCAVNSVKW NHTNLVVAST 60
GEDKKISLWR KNGQSLGTVP VTGKDGGDSA EECLSAISFS KKGSRYICSG GTGQIVKIWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCTCATAG GGTTCAAAAT TTTGTTTCTG CTGTTCTCTC GAGGAAAGGT AGAGTTCCCG 60
CATTGTCCGG ATTCTCAGAG ATTCATTCAT TAATCTGAGT TTTCTCGGGA AAATTTACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005828--C:kinetochore microtubule
GO:0000919--P:cell plate assembly
GO:0009553--P:embryo sac development
GO:0009555--P:pollen development
GO:0032467--P:positive regulation of cytokinesis
GO:0060236--P:regulation of mitotic spindle organization
GO:2000694--P:regulation of phragmoplast microtubule organization

KEGG

aly:ARALYDRAFT_487399

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	63.98	2.00e-88	320.00
IUUC-Aml-002397	Ailuropoda melanoleuca	31.33	4.00e-41	162.00
IUUC-Atr-002464	Amborella trichopoda	59.44	1.00e-173	603.00
IUUC-Apl-003870	Anas platyrhynchos	31.94	8.00e-38	151.00
IUUC-Aca-004925	Anolis carolinensis	33.01	1.00e-40	160.00
IUUC-Ath-006681	Arabidopsis thaliana	95.77	0.00e+00	1461.00
IUUC-Ame-010906	Astyanax mexicanus	29.13	1.00e-27	117.00
IUUC-Bta-013389	Bos taurus	32.43	6.00e-42	164.00
IUUC-Bdi-014340	Brachypodium distachyon	60.27	2.00e-170	592.00
IUUC-Bol-015773	Brassica oleracea	74.75	0.00e+00	1116.00
IUUC-Bra-017178	Brassica rapa	75.32	0.00e+00	1100.00
IUUC-Cja-019541	Callithrix jacchus	31.02	2.00e-39	156.00
IUUC-Cfa-021218	Canis familiaris	30.77	6.00e-41	161.00
IUUC-Cpo-021697	Cavia porcellus	29.08	3.00e-40	159.00
IUUC-Csa-023620	Chlorocebus sabaeus	29.89	6.00e-41	161.00
IUUC-Cho-025105	Choloepus hoffmanni	31.40	8.00e-31	128.00
IUUC-Cin-025293	Ciona intestinalis	32.97	1.00e-25	111.00
IUUC-Csv-026234	Ciona savignyi	30.48	6.00e-25	107.00
IUUC-Dre-028251	Danio rerio	33.33	1.00e-30	127.00
IUUC-Dno-029281	Dasypus novemcinctus	32.28	9.00e-39	154.00
IUUC-Ete-033113	Echinops telfairi	33.47	6.00e-38	151.00
IUUC-Eca-034230	Equus caballus	33.12	5.00e-40	158.00
IUUC-Eeu-034671	Erinaceus europaeus	32.20	9.00e-37	147.00
IUUC-Fca-035775	Felis catus	31.23	1.00e-39	157.00
IUUC-Fal-037557	Ficedula albicollis	30.27	6.00e-33	135.00
IUUC-Gmo-038586	Gadus morhua	30.65	9.00e-28	117.00
IUUC-Gga-040153	Gallus gallus	31.17	2.00e-36	146.00
IUUC-Gac-041385	Gasterosteus aculeatus	32.90	1.00e-32	134.00
IUUC-Gma-042844	Glycine max	60.30	0.00e+00	897.00
IUUC-Ggo-044576	Gorilla gorilla	29.63	2.00e-40	159.00
IUUC-Hsa-046198	Homo sapiens	29.63	2.00e-40	160.00
IUUC-Hvu-047794	Hordeum vulgare	72.67	4.00e-70	256.00
IUUC-Lch-050561	Latimeria chalumnae	26.79	1.00e-17	84.00
IUUC-Lpe-051469	Leersia perrieri	59.61	3.00e-175	607.00
IUUC-Loc-052816	Lepisosteus oculatus	32.87	8.00e-28	118.00
IUUC-Laf-053880	Loxodonta africana	31.63	1.00e-37	150.00
IUUC-Mcc-054977	Macaca mulatta	29.89	6.00e-41	161.00
IUUC-Meu-056141	Macropus eugenii	35.38	9.00e-37	147.00
IUUC-Mtr-058441	Medicago truncatula	57.85	0.00e+00	855.00
IUUC-Mga-060141	Meleagris gallopavo	32.46	2.00e-34	139.00
IUUC-Mmr-061201	Microcebus murinus	32.05	4.00e-40	159.00
IUUC-Mdo-061855	Monodelphis domestica	31.58	1.00e-36	147.00
IUUC-Mmu-064342	Mus musculus	31.73	2.00e-38	153.00
IUUC-Mac-065368	Musa acuminata	53.04	0.00e+00	714.00
IUUC-Mpu-066191	Mustela putorius furo	31.02	2.00e-40	160.00
IUUC-Mlu-067310	Myotis lucifugus	32.27	2.00e-40	159.00
IUUC-Nle-069990	Nomascus leucogenys	29.63	3.00e-40	159.00
IUUC-Opr-070336	Ochotona princeps	34.26	3.00e-37	149.00
IUUC-Ont-071675	Oreochromis niloticus	28.34	7.00e-34	138.00
IUUC-Oan-072772	Ornithorhynchus anatinus	34.60	3.00e-38	152.00
IUUC-Ocu-074095	Oryctolagus cuniculus	32.05	1.00e-39	157.00
IUUC-Oba-075327	Oryza barthii	58.90	4.00e-174	604.00
IUUC-Obr-076119	Oryza brachyantha	57.77	1.00e-169	589.00
IUUC-Ogl-077820	Oryza glaberrima	58.49	1.00e-172	599.00
IUUC-Ogu-078679	Oryza glumaepatula	58.90	5.00e-174	604.00
IUUC-Oin-079891	Oryza indica	58.90	2.00e-174	605.00
IUUC-Olo-080414	Oryza longistaminata	57.71	6.00e-151	527.00
IUUC-Ome-081888	Oryza meridionalis	58.68	2.00e-175	608.00
IUUC-Oni-082417	Oryza nivara	58.68	1.00e-173	602.00
IUUC-Opu-083393	Oryza punctata	51.08	0.00e+00	698.00
IUUC-Oru-084698	Oryza rufipogon	58.90	2.00e-174	605.00
IUUC-Osa-086121	Oryza sativa	58.68	1.00e-173	602.00
IUUC-Ola-086806	Oryzias latipes	32.60	4.00e-34	139.00
IUUC-Olu-087591	Ostreococcus lucimarinus	29.89	3.00e-21	95.50
IUUC-Oga-088622	Otolemur garnettii	32.91	4.00e-41	162.00
IUUC-Oar-090391	Ovis aries	32.43	2.00e-41	163.00
IUUC-Ptr-091036	Pan troglodytes	29.63	3.00e-40	159.00
IUUC-Pan-092576	Papio anubis	29.89	8.00e-41	161.00
IUUC-Psi-093450	Pelodiscus sinensis	32.13	2.00e-40	159.00
IUUC-Pma-094101	Petromyzon marinus	32.86	5.00e-32	130.00
IUUC-Ppa-095262	Physcomitrella patens	43.93	1.00e-171	595.00
IUUC-Pfo-097142	Poecilia formosa	28.68	2.00e-34	139.00
IUUC-Pab-097829	Pongo abelii	30.24	8.00e-41	161.00
IUUC-Pop-099687	Populus trichocarpa	61.64	0.00e+00	867.00
IUUC-Pca-100217	Procavia capensis	28.61	1.00e-32	134.00
IUUC-Ppe-101502	Prunus persica	60.27	0.00e+00	867.00
IUUC-Pva-102736	Pteropus vampyrus	32.27	1.00e-40	160.00
IUUC-Rno-104977	Rattus norvegicus	32.37	7.00e-39	154.00
IUUC-Sha-107003	Sarcophilus harrisii	35.65	4.00e-39	155.00
IUUC-Smo-109328	Selaginella moellendorffii	49.71	1.00e-138	486.00
IUUC-Sit-109796	Setaria italica	58.32	3.00e-174	604.00
IUUC-Sly-110941	Solanum lycopersicum	56.47	0.00e+00	800.00
IUUC-Stu-112314	Solanum tuberosum	57.11	0.00e+00	799.00
IUUC-Sar-112926	Sorex araneus	26.44	5.00e-31	129.00
IUUC-Sbi-113822	Sorghum bicolor	47.09	2.00e-136	479.00
IUUC-Ssc-116242	Sus scrofa	32.69	1.00e-38	153.00
IUUC-Tgu-116765	Taeniopygia guttata	30.03	2.00e-34	140.00
IUUC-Tru-117738	Takifugu rubripes	28.84	3.00e-34	139.00
IUUC-Tsy-118856	Tarsius syrichta	29.19	4.00e-37	149.00
IUUC-Tni-120871	Tetraodon nigroviridis	31.96	2.00e-36	147.00
IUUC-Tca-120965	Theobroma cacao	62.42	0.00e+00	870.00
IUUC-Tae-123957	Triticum aestivum	60.17	2.00e-168	585.00
IUUC-Tur-126840	Triticum urartu	65.65	7.00e-167	580.00
IUUC-Ttr-128551	Tursiops truncatus	32.06	8.00e-33	134.00
IUUC-Vpa-130324	Vicugna pacos	32.91	1.00e-41	163.00
IUUC-Vvi-131699	Vitis vinifera	61.07	0.00e+00	872.00
IUUC-Xtr-131956	Xenopus tropicalis	31.17	2.00e-39	156.00
IUUC-Xma-132982	Xiphophorus maculatus	29.54	5.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence