iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076743

Ensembl Protein ID

OB09G22210.1

UniProt Accession

J3MYZ2; J3MYZ2_ORYBR

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB09G22210	OB09G22210.1	OB09G22210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.90e-70	237.0	223	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl NlgNtC++N+v+Q+L+++  lr+ +l           p+ p+g+l++sl+klf e    ++  +a sp++l++ ++++ ++f+gy+ qD++E+l
   Q: 223  GLPNLGNTCFFNAVMQSLLALDRLRSKMLG----------PDVPTGALSMSLKKLFMETSasNDVGGALSPKNLFSNICSKYPQFRGYQMQDSHELL 309
           9*****************************..........345789**********99987777788****************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke........ 185
           +++ld+l++e ++                + + a+e+ +   +++++ +F+gql+s++   ec ++s+++++fldlslpvp+++  +k+        
   Q: 310  RCFLDGLRTEENE----------------AWKLADESSNAAIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPVPSRRPPAKSvssppakr 390
           ***********33................3344667899999***************************************9998888899****** PP
   S: 186  ................................................................................................. 185
                                                                                                            
   Q: 391  nkqsirdrnknrrygrisprvspivqvnnkekietvaecndsqipgsesgqvvcekepepsecsescasvpnleqtgtsnvedpacwldyiddadea 487
           ************************************************************************************************* PP
   S: 186  ................................................................................................. 185
                                                                                                            
   Q: 488  kseildsadsteaghiwedkgvihgpflpqdyalskeqvlgsehsgenliddatsshpiillpykefgstaeemdatvensqkpedalappavslte 584
           ************************************************************************************************* PP
   S: 186  ...............................................................slqdcLesftkeeelegenkyycekckkkq 215
                                                                          s++ cL+ ft++e l   + ++ce+c +++
   Q: 585  dnaqpasvgdgdqddfaglgdmfnepevtsevkketgtvenidvmawssnsaedevddsnapvSVEGCLALFTEPELLS--EPWHCEHCSNSV 675
           ******************************************************************************8..59******9765 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGKKLKAKTK NPRKTQQQQQ QREPAAALSD AGSGDAESQD AGNSTEEAAA ASASGREQCG 60
HYGGDIARLD KVLLEIMSSK HFASCEHCRD DMPRKKGGGG GKEKGGKQQK RKGGGQKGAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA AGTTGAAGGC GAAGACCAAG AACCCAAGGA AAACCCAGCA GCAGCAGCAG 60
CAACGGGAGC CAGCGGCGGC GCTCTCCGAT GCTGGATCTG GGGATGCTGA GTCGCAGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

obr:102722243

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	67.34	0.00e+00	1231.00
IUUC-Aml-001931	Ailuropoda melanoleuca	31.64	2.00e-32	133.00
IUUC-Atr-003015	Amborella trichopoda	33.75	4.00e-57	215.00
IUUC-Apl-004145	Anas platyrhynchos	36.55	2.00e-28	120.00
IUUC-Aca-004314	Anolis carolinensis	38.82	3.00e-27	116.00
IUUC-Aly-006422	Arabidopsis lyrata	38.97	1.00e-45	177.00
IUUC-Ath-006732	Arabidopsis thaliana	38.99	6.00e-50	192.00
IUUC-Ame-011659	Astyanax mexicanus	33.50	2.00e-24	107.00
IUUC-Bta-013362	Bos taurus	36.92	8.00e-31	128.00
IUUC-Bdi-014465	Brachypodium distachyon	66.09	0.00e+00	1226.00
IUUC-Bol-015191	Brassica oleracea	31.57	1.00e-61	230.00
IUUC-Bra-016751	Brassica rapa	42.51	5.00e-45	175.00
IUUC-Cja-019177	Callithrix jacchus	38.79	6.00e-32	131.00
IUUC-Cfa-020051	Canis familiaris	31.64	3.00e-32	132.00
IUUC-Cpo-021886	Cavia porcellus	31.00	1.00e-32	134.00
IUUC-Csa-024103	Chlorocebus sabaeus	38.79	6.00e-32	131.00
IUUC-Cho-024315	Choloepus hoffmanni	41.07	7.00e-20	91.70
IUUC-Csv-026075	Ciona savignyi	29.89	7.00e-18	84.70
IUUC-Cme-027348	Cyanidioschyzon merolae	34.53	6.00e-19	88.60
IUUC-Dre-028388	Danio rerio	36.04	3.00e-27	116.00
IUUC-Dno-029409	Dasypus novemcinctus	30.06	1.00e-32	134.00
IUUC-Dor-030443	Dipodomys ordii	38.41	1.00e-25	111.00
IUUC-Dme-031870	Drosophila melanogaster	32.20	2.00e-16	80.90
IUUC-Ete-032807	Echinops telfairi	39.07	2.00e-26	113.00
IUUC-Eca-033479	Equus caballus	36.45	9.00e-32	131.00
IUUC-Eeu-034835	Erinaceus europaeus	35.14	4.00e-26	112.00
IUUC-Fca-036320	Felis catus	31.38	3.00e-32	132.00
IUUC-Fal-037029	Ficedula albicollis	29.94	6.00e-31	128.00
IUUC-Gmo-039480	Gadus morhua	35.00	3.00e-25	109.00
IUUC-Gga-040527	Gallus gallus	27.41	8.00e-28	118.00
IUUC-Gac-042343	Gasterosteus aculeatus	34.63	6.00e-26	112.00
IUUC-Gma-043919	Glycine max	31.56	4.00e-71	262.00
IUUC-Ggo-045598	Gorilla gorilla	37.85	5.00e-31	129.00
IUUC-Hsa-046598	Homo sapiens	37.85	5.00e-31	128.00
IUUC-Hvu-047146	Hordeum vulgare	67.18	0.00e+00	1229.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	38.32	3.00e-32	132.00
IUUC-Lch-050536	Latimeria chalumnae	38.89	1.00e-29	124.00
IUUC-Lpe-050703	Leersia perrieri	81.31	0.00e+00	1566.00
IUUC-Loc-051814	Lepisosteus oculatus	37.07	6.00e-27	115.00
IUUC-Laf-053732	Loxodonta africana	30.72	8.00e-33	134.00
IUUC-Mcc-054661	Macaca mulatta	38.79	7.00e-32	131.00
IUUC-Meu-055967	Macropus eugenii	27.88	6.00e-22	98.60
IUUC-Mtr-057945	Medicago truncatula	39.86	2.00e-52	200.00
IUUC-Mla-059026	Melampsora laricipopulina	35.07	3.00e-18	85.90
IUUC-Mga-059551	Meleagris gallopavo	29.31	3.00e-30	125.00
IUUC-Mvi-060391	Microbotryum violaceum	33.33	1.00e-19	91.30
IUUC-Mmr-061747	Microcebus murinus	31.87	2.00e-32	133.00
IUUC-Mdo-062220	Monodelphis domestica	36.87	4.00e-28	119.00
IUUC-Mmu-063582	Mus musculus	38.97	4.00e-30	125.00
IUUC-Mac-064941	Musa acuminata	43.39	2.00e-83	302.00
IUUC-Mpu-066339	Mustela putorius furo	38.94	9.00e-32	131.00
IUUC-Mlu-067511	Myotis lucifugus	39.25	1.00e-32	134.00
IUUC-Nle-069252	Nomascus leucogenys	38.79	5.00e-32	132.00
IUUC-Opr-070969	Ochotona princeps	38.32	3.00e-30	126.00
IUUC-Ont-071786	Oreochromis niloticus	34.50	3.00e-26	113.00
IUUC-Oan-073656	Ornithorhynchus anatinus	29.94	6.00e-28	118.00
IUUC-Ocu-074704	Oryctolagus cuniculus	30.90	4.00e-32	132.00
IUUC-Oba-075094	Oryza barthii	84.97	0.00e+00	1669.00
IUUC-Ogl-077739	Oryza glaberrima	82.38	0.00e+00	1373.00
IUUC-Ogu-078851	Oryza glumaepatula	85.16	0.00e+00	1672.00
IUUC-Oin-079402	Oryza indica	84.92	0.00e+00	1670.00
IUUC-Olo-080431	Oryza longistaminata	86.78	0.00e+00	1612.00
IUUC-Ome-081580	Oryza meridionalis	85.04	0.00e+00	1666.00
IUUC-Oni-082644	Oryza nivara	85.08	0.00e+00	1671.00
IUUC-Opu-083452	Oryza punctata	84.74	0.00e+00	1655.00
IUUC-Oru-084546	Oryza rufipogon	85.07	0.00e+00	1669.00
IUUC-Osa-085858	Oryza sativa	84.97	0.00e+00	1667.00
IUUC-Ola-086795	Oryzias latipes	32.11	5.00e-26	112.00
IUUC-Oga-088713	Otolemur garnettii	39.25	1.00e-32	134.00
IUUC-Oar-089971	Ovis aries	36.45	2.00e-30	127.00
IUUC-Ptr-091670	Pan troglodytes	38.32	2.00e-31	130.00
IUUC-Pan-092293	Papio anubis	38.79	7.00e-32	131.00
IUUC-Psi-093101	Pelodiscus sinensis	38.50	1.00e-28	120.00
IUUC-Ppa-095584	Physcomitrella patens	31.13	1.00e-40	161.00
IUUC-Pfo-097202	Poecilia formosa	34.85	2.00e-27	117.00
IUUC-Pab-098773	Pongo abelii	38.32	3.00e-31	129.00
IUUC-Pop-099588	Populus trichocarpa	32.11	3.00e-62	233.00
IUUC-Pca-101069	Procavia capensis	34.59	3.00e-26	113.00
IUUC-Ppe-101794	Prunus persica	33.53	8.00e-66	244.00
IUUC-Pva-103092	Pteropus vampyrus	35.68	3.00e-26	113.00
IUUC-Rno-105237	Rattus norvegicus	37.85	2.00e-29	123.00
IUUC-Sha-106889	Sarcophilus harrisii	31.29	3.00e-29	122.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	35.37	2.00e-20	93.60
IUUC-Spo-108149	Schizosaccharomyces pombe	38.18	1.00e-25	110.00
IUUC-Sit-110283	Setaria italica	67.97	0.00e+00	1328.00
IUUC-Sly-111491	Solanum lycopersicum	38.02	3.00e-59	222.00
IUUC-Stu-112820	Solanum tuberosum	34.15	4.00e-61	229.00
IUUC-Sar-113530	Sorex araneus	39.13	2.00e-31	130.00
IUUC-Sbi-113785	Sorghum bicolor	65.89	0.00e+00	1243.00
IUUC-Ssc-116091	Sus scrofa	38.46	2.00e-31	130.00
IUUC-Tgu-117478	Taeniopygia guttata	30.06	6.00e-31	128.00
IUUC-Tru-118640	Takifugu rubripes	35.82	9.00e-26	111.00
IUUC-Tsy-118869	Tarsius syrichta	36.63	2.00e-25	110.00
IUUC-Tni-120015	Tetraodon nigroviridis	36.04	2.00e-27	117.00
IUUC-Tca-121701	Theobroma cacao	31.31	4.00e-67	249.00
IUUC-Tae-125305	Triticum aestivum	67.63	0.00e+00	1194.00
IUUC-Tur-126788	Triticum urartu	67.00	0.00e+00	1071.00
IUUC-Tbe-128041	Tupaia belangeri	34.47	4.00e-24	105.00
IUUC-Ttr-128271	Tursiops truncatus	29.86	1.00e-31	130.00
IUUC-Vpa-130674	Vicugna pacos	30.61	3.00e-32	132.00
IUUC-Xtr-131869	Xenopus tropicalis	37.76	8.00e-29	121.00
IUUC-Xma-134195	Xiphophorus maculatus	33.47	2.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence