iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121785

Ensembl Protein ID

EOX99609

UniProt Accession

A0A061E3K2; A0A061E3K2_THECC

Genbank Protein ID

EOX99609.1

Protein Name

Zinc finger family protein isoform 1

Genbank Nucleotide ID

CM001880

Gene Name

TCM_008331

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_008331	EOX99610	EOX99610
TCM_008331	EOX99609	EOX99609

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.00e-10	40.9	142	190
E3 activity/RING/RING	3.50e-14	54.0	145	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
             +C+I ++l++ Pv++p+G+ +  ++ +kw+a+g++tc  +r+++ + 
   Q: 142  NINCSICMQLPERPVTTPCGHNFCLKCFQKWVAQGKRTCANCRSQIPSA 190
           578***************************************9998765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +++ p+++pCgH f+++C+qkw     +++++ +C  Cr
   Q: 145  CSICMQLPER-PVTTPCGHNFCLKCFQKW-----VAQGKRTCANCR 184
           **********.9*****************.....89******9998 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MALVSQLPCD GDGICMICKN KPSPEDTLTC KTCATPWHVT CLPSSARPQT IAEALRWDCP 60
DCSLTDHPHP PIAEKTGSSD ELVAAVRAIQ SDDSLTELEK ARRRQELVSG GGARSSSDDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATTGGTA GCAAAAATTT CCCTTTATAT AGCAGCAAAG GATGAAGAGG GAAATCAAAA 60
AATTTCAAAA GTTATTCTCA ACAAAAATTC CATTACAGAA CCGCGCCCCT TTCTCACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	69.71	6.00e-164	570.00
IUUC-Atr-002603	Amborella trichopoda	68.12	0.00e+00	842.00
IUUC-Ago-007781	Ashbya gossypii	35.82	1.00e-07	50.10
IUUC-Afl-008666	Aspergillus flavus	26.49	1.00e-06	47.00
IUUC-Aor-010037	Aspergillus oryzae	26.49	1.00e-06	46.60
IUUC-Bdi-014586	Brachypodium distachyon	63.02	0.00e+00	749.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	35.21	2.00e-79	289.00
IUUC-Dno-029950	Dasypus novemcinctus	31.96	9.00e-44	171.00
IUUC-Dme-031618	Drosophila melanogaster	38.98	4.00e-08	52.00
IUUC-Ete-032923	Echinops telfairi	36.14	5.00e-10	58.50
IUUC-Gac-041859	Gasterosteus aculeatus	34.07	1.00e-50	194.00
IUUC-Gma-044194	Glycine max	69.72	0.00e+00	865.00
IUUC-Hvu-047471	Hordeum vulgare	70.65	0.00e+00	655.00
IUUC-Mtr-058805	Medicago truncatula	66.89	0.00e+00	827.00
IUUC-Ncr-068857	Neurospora crassa	29.73	6.00e-10	59.30
IUUC-Olo-080527	Oryza longistaminata	57.17	0.00e+00	699.00
IUUC-Ppa-095940	Physcomitrella patens	59.31	0.00e+00	751.00
IUUC-Pop-099561	Populus trichocarpa	74.22	0.00e+00	924.00
IUUC-Sce-106362	Saccharomyces cerevisiae	34.12	3.00e-09	55.50
IUUC-Sly-111415	Solanum lycopersicum	67.61	0.00e+00	893.00
IUUC-Stu-112842	Solanum tuberosum	70.58	0.00e+00	890.00
IUUC-Tae-124962	Triticum aestivum	62.76	0.00e+00	692.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence