iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043110

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100792874; GLYMA_12G060700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G06460	GLYMA12G06460.1	GLYMA12G06460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-06	29.2	182	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f    +  + lpC+H++h +C+  w       s + +CP+Cr
   Q: 182  CAVCKEVFelhAE-ARELPCKHIYHSECILPW------LSMRNSCPVCR 223
           ******9966444.888***************......999*******8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MNLDTQPGTP SYWCYSCTRF VHLSVQATIA CPHCQSGFVE EIRAGAEASP RHRLSPFPDD 60
PLSFRRQGFR RRRREGAGNR SPFNPVIVLR GPGDDSAAAD HDGASTFELF YDDGDGTGLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAGGCAAA TGCTTGCTCA TTTCCTTGGC AGTTCACATT AACACACGCT CCTCTCTCTC 60
TCTCTGTCTG TGTTCTCCAC TTCCCTTAAA TTCACGCTCC CCCCTGTAAC CCTTCTCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100792874

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014752	Brachypodium distachyon	48.77	8.00e-68	250.00
IUUC-Hvu-047236	Hordeum vulgare	64.50	4.00e-61	227.00
IUUC-Lpe-051386	Leersia perrieri	54.29	6.00e-84	304.00
IUUC-Oba-075840	Oryza barthii	60.00	8.00e-63	233.00
IUUC-Obr-076496	Oryza brachyantha	65.66	4.00e-63	234.00
IUUC-Ogu-078829	Oryza glumaepatula	60.00	8.00e-63	233.00
IUUC-Olo-080227	Oryza longistaminata	41.37	5.00e-46	177.00
IUUC-Pop-100030	Populus trichocarpa	58.07	2.00e-78	286.00
IUUC-Sbi-114707	Sorghum bicolor	57.14	3.00e-59	222.00
IUUC-Tae-123502	Triticum aestivum	51.83	4.00e-76	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence