iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__3013__AT2G47700.1	fgenesh2_kg.4__3013__AT2G47700.1	fgenesh2_kg.4__3013__AT2G47700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-07	30.9	38	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.kdgplv...lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle   +dg+++   l+CgH fh+dC+    g+  + +++ +CP Cr
   Q: 38   CSICLELVvDDGTRSkakLQCGHEFHLDCI----GSAFNMKGAMQCPNCR 83
           ******88777777544488*********9....55579**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAGAKDSGCD DHRRIAGGWG PGKRGNQEDA SSPVEVSCSI CLELVVDDGT RSKAKLQCGH 60
EFHLDCIGSA FNMKGAMQCP NCRNVEKGQW LYANGSTRPF PEFSMEDWIP EEDLYALTYP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCATCTCT AACAGGTCGG ACGAGAGAGA GAGAGAAGAG GAAGGATAGA TTTGTAAGAT 60
TATTACCGCA TCGGCGTTCC AAAAGGCAGA CGAAATCGGA GAGAAACAAA GAGAGATAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_483953

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006651	Arabidopsis thaliana	91.29	0.00e+00	655.00
IUUC-Bdi-014427	Brachypodium distachyon	35.77	1.00e-40	160.00
IUUC-Bol-016523	Brassica oleracea	77.21	9.00e-148	515.00
IUUC-Bra-016821	Brassica rapa	76.35	2.00e-145	508.00
IUUC-Hvu-047201	Hordeum vulgare	59.52	1.00e-40	159.00
IUUC-Opr-070290	Ochotona princeps	32.05	2.00e-05	43.50
IUUC-Oan-073083	Ornithorhynchus anatinus	32.88	2.00e-05	43.10
IUUC-Sbi-114202	Sorghum bicolor	36.47	4.00e-40	158.00
IUUC-Tca-121773	Theobroma cacao	40.48	4.00e-47	181.00
IUUC-Tbe-127561	Tupaia belangeri	30.77	7.00e-05	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence