iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110840

Ensembl Protein ID

Solyc05g015070.2.1

UniProt Accession

K4BYM5; K4BYM5_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g015070.2	Solyc05g015070.2.1	Solyc05g015070.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-26	93.3	279	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee++CpIsl+lM +Pv+++sG++y++ +Iekw+++g++tcP+t+q+l +  l+Pn+ ++ l+ +wce+ +
   Q: 279  PPEELRCPISLQLMYNPVIIASGQSYEKICIEKWFSDGHNTCPKTQQELPHLGLTPNYCVKGLVASWCEQYG 350
           69*******************************************************************976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MENSEVEENL LSIGEPKLHG GMCKSLSAVY AKVLGIFPEL EAARPRSTSG IQALCALHIA 60
LEKTKTVLQH CAECSKLYLA ITGDSIVLKF ERARCALEDS LKRVEDIVPQ SIGCQISEVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTTATTAC CTCTTCCCTC TTTCTCTCTT TCTCCATCTA AATAATTAAA AAAATATCAA 60
AGATTTTCAT CATTCTCAAA AAAAAAGCTC AAGTTTTTGG ATCTGCAAAC CATACAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	52.66	0.00e+00	783.00
IUUC-Atr-002816	Amborella trichopoda	53.96	0.00e+00	771.00
IUUC-Aly-005662	Arabidopsis lyrata	63.24	0.00e+00	925.00
IUUC-Ath-006967	Arabidopsis thaliana	62.98	0.00e+00	917.00
IUUC-Bdi-014509	Brachypodium distachyon	54.43	0.00e+00	773.00
IUUC-Bol-015443	Brassica oleracea	62.18	0.00e+00	934.00
IUUC-Bra-017668	Brassica rapa	62.84	0.00e+00	940.00
IUUC-Gma-043476	Glycine max	66.80	0.00e+00	1026.00
IUUC-Hvu-047761	Hordeum vulgare	52.68	0.00e+00	769.00
IUUC-Lpe-051154	Leersia perrieri	54.78	0.00e+00	789.00
IUUC-Mtr-058026	Medicago truncatula	65.15	0.00e+00	952.00
IUUC-Mac-064644	Musa acuminata	50.58	0.00e+00	677.00
IUUC-Oba-075037	Oryza barthii	54.48	0.00e+00	818.00
IUUC-Obr-076068	Oryza brachyantha	54.05	0.00e+00	788.00
IUUC-Ogl-077029	Oryza glaberrima	54.48	0.00e+00	818.00
IUUC-Ogu-078230	Oryza glumaepatula	54.24	0.00e+00	811.00
IUUC-Oin-079566	Oryza indica	54.41	0.00e+00	816.00
IUUC-Olo-080879	Oryza longistaminata	55.42	0.00e+00	776.00
IUUC-Ome-081577	Oryza meridionalis	54.29	0.00e+00	814.00
IUUC-Oni-082610	Oryza nivara	54.17	0.00e+00	810.00
IUUC-Opu-083186	Oryza punctata	54.17	0.00e+00	817.00
IUUC-Oru-084375	Oryza rufipogon	53.85	0.00e+00	805.00
IUUC-Osa-085376	Oryza sativa	54.15	0.00e+00	808.00
IUUC-Ppa-095879	Physcomitrella patens	37.93	1.00e-82	300.00
IUUC-Pop-100088	Populus trichocarpa	69.38	0.00e+00	1104.00
IUUC-Ppe-101913	Prunus persica	69.41	0.00e+00	1083.00
IUUC-Sit-109865	Setaria italica	52.99	0.00e+00	798.00
IUUC-Stu-112347	Solanum tuberosum	97.27	0.00e+00	1427.00
IUUC-Sbi-114310	Sorghum bicolor	52.72	0.00e+00	789.00
IUUC-Tca-121734	Theobroma cacao	70.93	0.00e+00	1090.00
IUUC-Tae-123152	Triticum aestivum	52.75	0.00e+00	781.00
IUUC-Tur-126692	Triticum urartu	49.54	0.00e+00	675.00
IUUC-Vvi-131273	Vitis vinifera	71.26	0.00e+00	1157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence