iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095195

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545207

Gene Name

PHYPADRAFT_225435

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S318_20V6	PP1S318_20V6.1	PP1S318_20V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-29	101.4	79	118
UBD/Beta-Prp	8.60e-45	153.9	129	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++     +ll+++s+D+t+++WD r g++ +
   Q: 79   GHTDSVDQLCWdpKHaDLLATASGDKTVRLWDARAGKCSQ 118
           8**********9533799*******************987 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnll 152
           ++++pdg+ ++ g +D+ + + d++++k +h+ k  +++v  ++++ +g+ +  ++   t++v + ++ q l+ tl  h++   c++++p+g++l
   Q: 129  ITYKPDGSHIAVGNRDDELTIIDVRKFKAIHKRK-FTYEVNEIAWNTTGELFFLTTGNGTVEVLEYPSLQTLQ-TLVAHTAGCYCIAIDPTGRYL 221
           789*******************************.**************************************.********************* PP
   S: 153  vsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           + Gs+D  v lWd++ + ++rt+t+  + +v+ +sf+++g++++s+s+d  + + ++ tg+ v +  + ++ ++sv+  p+ ++l+ +++D+
   Q: 222  AVGSADALVSLWDVSEMLCVRTFTK-LEWPVRTISFNHDGQYIASASEDLFIDIAEVDTGRSVFQIPC-RAAMNSVEWNPKYNLLAFAADDK 311
           ************************9.**********************************97776666.77899999999999999999886 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSTVEVVDVA PGPSAPVTGK ALFQNLLTRE FLGHKKKVHS VAWNCAGKKL ASGSVDQTAR 60
IWHIEPHGHS KAKDMELKGH TDSVDQLCWD PKHADLLATA SGDKTVRLWD ARAGKCSQQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAGTCTC GTCGAAGGAA GTAAGGCATT GCTAGAGTGG CTAAAAATGT GGGCAGCACA 60
TAAAAGTTAT TAGTTCGAGA GTTGTGTGTT CAGACATGCA CTTCCATTCG GAGGATCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus
GO:0010267--P:production of ta-siRNAs involved in RNA interference

KEGG

ppp:PHYPADRAFT_225435

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	74.32	1.00e-138	485.00
IUUC-Aml-001264	Ailuropoda melanoleuca	51.69	4.00e-97	347.00
IUUC-Atr-003050	Amborella trichopoda	86.56	4.00e-164	569.00
IUUC-Apl-003426	Anas platyrhynchos	47.53	3.00e-68	250.00
IUUC-Aca-004931	Anolis carolinensis	51.82	9.00e-68	248.00
IUUC-Aly-006237	Arabidopsis lyrata	83.01	6.00e-158	549.00
IUUC-Ath-007581	Arabidopsis thaliana	83.33	3.00e-158	550.00
IUUC-Acl-008253	Aspergillus clavatus	29.38	5.00e-45	174.00
IUUC-Afl-008519	Aspergillus flavus	36.59	2.00e-48	185.00
IUUC-Afu-008886	Aspergillus fumigatus	29.91	5.00e-41	161.00
IUUC-Ani-009275	Aspergillus nidulans	35.06	6.00e-46	177.00
IUUC-Ang-009862	Aspergillus niger	33.33	2.00e-45	175.00
IUUC-Ate-010247	Aspergillus terreus	32.83	4.00e-45	174.00
IUUC-Ame-010828	Astyanax mexicanus	52.61	1.00e-96	345.00
IUUC-Bgr-012163	Blumeria graminis	30.35	5.00e-36	144.00
IUUC-Bta-013514	Bos taurus	45.23	4.00e-82	297.00
IUUC-Bci-013639	Botrytis cinerea	30.42	2.00e-43	169.00
IUUC-Bdi-015049	Brachypodium distachyon	74.04	3.00e-143	500.00
IUUC-Bol-015401	Brassica oleracea	78.91	2.00e-150	524.00
IUUC-Bra-017867	Brassica rapa	79.23	6.00e-151	525.00
IUUC-Cel-018699	Caenorhabditis elegans	29.39	3.00e-34	138.00
IUUC-Cja-019591	Callithrix jacchus	52.31	1.00e-98	352.00
IUUC-Cfa-020692	Canis familiaris	51.69	3.00e-97	347.00
IUUC-Cpo-022135	Cavia porcellus	46.36	2.00e-77	281.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	35.67	4.00e-50	191.00
IUUC-Csa-023408	Chlorocebus sabaeus	52.31	1.00e-98	352.00
IUUC-Cho-024340	Choloepus hoffmanni	51.72	2.00e-59	220.00
IUUC-Cin-025418	Ciona intestinalis	54.96	3.00e-43	166.00
IUUC-Csv-026130	Ciona savignyi	53.77	8.00e-102	362.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	30.94	1.00e-44	172.00
IUUC-Cne-026775	Cryptococcus neoformans	40.54	3.00e-21	95.90
IUUC-Dre-028634	Danio rerio	52.94	9.00e-97	345.00
IUUC-Dno-029449	Dasypus novemcinctus	52.00	1.00e-97	348.00
IUUC-Dor-030301	Dipodomys ordii	58.71	2.00e-55	208.00
IUUC-Dse-031341	Dothistroma septosporum	29.02	3.00e-36	144.00
IUUC-Dme-031674	Drosophila melanogaster	52.16	2.00e-86	311.00
IUUC-Ete-033136	Echinops telfairi	51.69	7.00e-97	346.00
IUUC-Eca-034432	Equus caballus	47.56	8.00e-88	316.00
IUUC-Fca-035694	Felis catus	51.69	3.00e-97	347.00
IUUC-Fal-037328	Ficedula albicollis	50.46	4.00e-97	347.00
IUUC-Fox-037894	Fusarium oxysporum	31.68	7.00e-46	176.00
IUUC-Fso-038266	Fusarium solani	29.77	9.00e-42	163.00
IUUC-Gmo-039617	Gadus morhua	51.96	7.00e-95	339.00
IUUC-Ggr-039819	Gaeumannomyces graminis	28.71	2.00e-36	145.00
IUUC-Gga-041164	Gallus gallus	52.41	7.00e-97	346.00
IUUC-Gac-042407	Gasterosteus aculeatus	51.94	2.00e-96	344.00
IUUC-Gma-043718	Glycine max	84.64	4.00e-162	562.00
IUUC-Ggo-044989	Gorilla gorilla	52.31	2.00e-98	351.00
IUUC-Hsa-046784	Homo sapiens	52.31	1.00e-98	352.00
IUUC-Hvu-047633	Hordeum vulgare	75.35	6.00e-99	352.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	37.73	4.00e-56	211.00
IUUC-Kpa-049182	Komagataella pastoris	24.69	1.00e-16	79.70
IUUC-Lch-049894	Latimeria chalumnae	53.77	1.00e-97	348.00
IUUC-Lpe-051061	Leersia perrieri	65.37	4.00e-120	423.00
IUUC-Loc-052424	Lepisosteus oculatus	51.94	4.00e-97	347.00
IUUC-Lma-053127	Leptosphaeria maculans	34.05	7.00e-49	188.00
IUUC-Laf-053396	Loxodonta africana	52.31	5.00e-98	350.00
IUUC-Mcc-055517	Macaca mulatta	52.31	1.00e-98	352.00
IUUC-Meu-056034	Macropus eugenii	53.29	4.00e-97	347.00
IUUC-Mor-057011	Magnaporthe oryzae	27.98	4.00e-26	111.00
IUUC-Mpo-057490	Magnaporthe poae	28.71	3.00e-36	144.00
IUUC-Mtr-057927	Medicago truncatula	83.33	1.00e-159	554.00
IUUC-Mla-058945	Melampsora laricipopulina	37.88	4.00e-49	187.00
IUUC-Mga-060155	Meleagris gallopavo	54.10	2.00e-81	295.00
IUUC-Mvi-060344	Microbotryum violaceum	33.65	2.00e-48	185.00
IUUC-Mmr-060834	Microcebus murinus	52.62	2.00e-98	352.00
IUUC-Mdo-062587	Monodelphis domestica	53.64	4.00e-97	347.00
IUUC-Mmu-063395	Mus musculus	52.00	9.00e-98	349.00
IUUC-Mac-064579	Musa acuminata	81.31	3.00e-157	546.00
IUUC-Mpu-066688	Mustela putorius furo	54.29	2.00e-88	318.00
IUUC-Mlu-067299	Myotis lucifugus	52.00	5.00e-98	350.00
IUUC-Nfi-068562	Neosartorya fischeri	30.33	2.00e-43	168.00
IUUC-Ncr-068654	Neurospora crassa	30.49	1.00e-40	159.00
IUUC-Nle-069736	Nomascus leucogenys	51.69	3.00e-96	344.00
IUUC-Ont-071763	Oreochromis niloticus	52.61	5.00e-97	346.00
IUUC-Ocu-074909	Oryctolagus cuniculus	51.69	1.00e-97	348.00
IUUC-Oba-075902	Oryza barthii	66.02	1.00e-120	424.00
IUUC-Obr-076613	Oryza brachyantha	74.43	3.00e-141	493.00
IUUC-Ogl-077009	Oryza glaberrima	73.46	2.00e-140	490.00
IUUC-Ogu-078344	Oryza glumaepatula	66.02	1.00e-120	424.00
IUUC-Oin-079773	Oryza indica	73.46	2.00e-140	490.00
IUUC-Olo-080474	Oryza longistaminata	70.15	3.00e-83	300.00
IUUC-Ome-081837	Oryza meridionalis	64.02	2.00e-58	217.00
IUUC-Oni-082263	Oryza nivara	66.02	1.00e-120	424.00
IUUC-Opu-083813	Oryza punctata	73.79	4.00e-141	493.00
IUUC-Oru-084610	Oryza rufipogon	66.02	1.00e-120	425.00
IUUC-Osa-085415	Oryza sativa	73.46	2.00e-140	490.00
IUUC-Ola-086659	Oryzias latipes	52.26	3.00e-97	347.00
IUUC-Olu-087649	Ostreococcus lucimarinus	42.81	8.00e-67	246.00
IUUC-Oga-087923	Otolemur garnettii	52.31	3.00e-98	350.00
IUUC-Oar-089688	Ovis aries	51.69	8.00e-97	346.00
IUUC-Ptr-091628	Pan troglodytes	52.31	1.00e-98	352.00
IUUC-Pan-092586	Papio anubis	51.83	6.00e-97	346.00
IUUC-Psi-093701	Pelodiscus sinensis	54.92	1.00e-64	238.00
IUUC-Pma-094465	Petromyzon marinus	52.49	2.00e-95	341.00
IUUC-Pno-094767	Phaeosphaeria nodorum	33.21	9.00e-46	177.00
IUUC-Pfo-097383	Poecilia formosa	51.28	2.00e-96	344.00
IUUC-Pab-098669	Pongo abelii	51.51	7.00e-99	352.00
IUUC-Pop-099409	Populus trichocarpa	84.92	2.00e-162	564.00
IUUC-Pca-100769	Procavia capensis	46.20	2.00e-76	278.00
IUUC-Ppe-101321	Prunus persica	83.99	1.00e-160	558.00
IUUC-Pva-102759	Pteropus vampyrus	51.69	1.00e-97	348.00
IUUC-Pgr-103535	Puccinia graminis	39.02	1.00e-54	205.00
IUUC-Ptt-103820	Puccinia triticina	39.34	2.00e-54	205.00
IUUC-Pte-104271	Pyrenophora teres	33.82	2.00e-44	172.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	35.39	1.00e-42	167.00
IUUC-Rno-106126	Rattus norvegicus	52.00	7.00e-98	349.00
IUUC-Sha-107146	Sarcophilus harrisii	51.08	2.00e-95	342.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	38.69	6.00e-58	216.00
IUUC-Spo-108324	Schizosaccharomyces pombe	41.05	4.00e-59	220.00
IUUC-Smo-108990	Selaginella moellendorffii	84.95	2.00e-164	570.00
IUUC-Sit-110773	Setaria italica	71.94	2.00e-137	480.00
IUUC-Sly-111619	Solanum lycopersicum	85.90	8.00e-163	565.00
IUUC-Stu-112241	Solanum tuberosum	86.23	1.00e-162	564.00
IUUC-Sbi-114842	Sorghum bicolor	72.26	6.00e-137	479.00
IUUC-Sre-115070	Sporisorium reilianum	34.63	1.00e-50	192.00
IUUC-Ssc-115581	Sus scrofa	51.69	3.00e-97	347.00
IUUC-Tgu-117354	Taeniopygia guttata	51.13	7.00e-94	336.00
IUUC-Tru-117745	Takifugu rubripes	51.31	3.00e-95	340.00
IUUC-Tni-120050	Tetraodon nigroviridis	51.31	5.00e-94	336.00
IUUC-Tca-121279	Theobroma cacao	85.06	7.00e-164	568.00
IUUC-Tre-121952	Trichoderma reesei	32.67	1.00e-48	186.00
IUUC-Tvi-122581	Trichoderma virens	32.01	8.00e-48	183.00
IUUC-Tae-125697	Triticum aestivum	73.08	3.00e-142	497.00
IUUC-Tur-126279	Triticum urartu	71.06	4.00e-137	479.00
IUUC-Tme-127000	Tuber melanosporum	33.82	4.00e-45	174.00
IUUC-Ttr-128405	Tursiops truncatus	53.70	4.00e-84	303.00
IUUC-Uma-129547	Ustilago maydis	35.50	8.00e-51	193.00
IUUC-Vda-129689	Verticillium dahliae	30.38	2.00e-38	152.00
IUUC-Vvi-131345	Vitis vinifera	85.25	3.00e-162	563.00
IUUC-Xtr-132136	Xenopus tropicalis	51.95	3.00e-94	337.00
IUUC-Xma-133767	Xiphophorus maculatus	51.61	4.00e-96	343.00
IUUC-Yli-134522	Yarrowia lipolytica	28.82	6.00e-31	127.00
IUUC-Zma-135816	Zea mays	72.46	2.00e-135	474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence