• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Ppa-095678
UUCD1 version UUC-PhP-00412
Ensembl Protein ID PP1S87_39V6.1
UniProt Accession A9SK61; A9SK61_PHYPA
Genbank Protein ID EDQ68364.1
Protein Name Predicted protein
Genbank Nucleotide ID DS544976
Gene Name PHYPADRAFT_213175
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S87_39V6 PP1S87_39V6.1 PP1S87_39V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.50e-40 135.0 471 504
UBD/Beta-Prp 4.60e-105 351.8 308 547
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+++v++l+f ++  +l+s+s+D+t+k+WD+ +
   Q: 471  GHEGPVHGLSFsPTsEMLASSSWDKTVKIWDVFE 504
           8***********777****************855 PP
   

   UBD/Beta-Prp
   S: 16   vkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
            +f   ++++a g+++ g + vw+++t++ + + +gh   v+++ fspd+++l++g++D+ +k+w++ +g+c++t+++h++s++++ f p ++++v
   Q: 308  ATFNAAGNWIALGCASlGQLLVWEWRTETQVLKQQGHYFDVNCLAFSPDSQYLASGADDNKLKLWNVASGSCFVTFTEHTNSITAVLFLPANHVVV 403
           5678889*******986899**************************************************************************** PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr.tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           s+s d t+r +d+  +  ++++ +++     +++ +p+g +l +G+lD+ ++ +W++ktg+ll+ l+g h+++v+ lsf+++++ l+s s d+tvk
   Q: 404  SASLDGTVRAFDMVRYRNFRTFTTPTPTQFVSLAADPSGEVLCAGTLDGfQIYVWSVKTGRLLDVLSG-HEGPVHGLSFSPTSEMLASSSWDKTVK 498
           ********************989999999999****************956****************9.*************************** PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           +wd+ +g+  ++   ht  v+ v   p+++ +++ + Dg i +Wd + g
   Q: 499  IWDVFEGKGNVETFTHTHDVLTVVYRPDSKQIACSTLDGHIHFWDPTDG 547
           *********9**********************************96655 PP
   
Organism Physcomitrella patens
Protein Sequence
(Fasta)
MNFQFSNLLG APYRGGNITF KKDVLLLSPV GNRVSVTDLQ KSESTTLRCE NGKSVSRIEV 60
SPDGTLLLSV DEDGRSILVN LHTQQVLHHF SFKGPVSALK FSPDGKLIAA GVGKLVQLWR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ppa-095678|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTGGAGACG TTCAGTCTCT GCTGCACTTC ACCGGCGACC CCGACGCCCT GTGGGGCAGA 60
ATTGCGTGTT GGAGTCGGAT CAAAGGTCGA AGGGAAGTCG GAATTGGCAG CAGAATCAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ppa-095678|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly
KEGG ppp:PHYPADRAFT_213175
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001932 Ailuropoda melanoleuca 42.55 0.00e+00 696.00
IUUC-Atr-003033 Amborella trichopoda 55.33 0.00e+00 961.00
IUUC-Apl-003219 Anas platyrhynchos 43.34 0.00e+00 704.00
IUUC-Aca-004950 Anolis carolinensis 43.47 0.00e+00 703.00
IUUC-Aly-006213 Arabidopsis lyrata 55.54 0.00e+00 978.00
IUUC-Ath-006593 Arabidopsis thaliana 55.57 0.00e+00 966.00
IUUC-Ago-007916 Ashbya gossypii 43.83 0.00e+00 709.00
IUUC-Acl-008225 Aspergillus clavatus 44.65 0.00e+00 729.00
IUUC-Afl-008390 Aspergillus flavus 43.86 0.00e+00 730.00
IUUC-Afu-009039 Aspergillus fumigatus 45.14 0.00e+00 733.00
IUUC-Ani-009228 Aspergillus nidulans 41.91 0.00e+00 627.00
IUUC-Ang-009663 Aspergillus niger 44.19 0.00e+00 702.00
IUUC-Aor-009923 Aspergillus oryzae 43.86 0.00e+00 730.00
IUUC-Ate-010264 Aspergillus terreus 44.75 0.00e+00 741.00
IUUC-Ame-010790 Astyanax mexicanus 38.37 2.00e-78 285.00
IUUC-Bgr-012066 Blumeria graminis 42.89 0.00e+00 697.00
IUUC-Bta-012399 Bos taurus 42.74 0.00e+00 684.00
IUUC-Bci-013757 Botrytis cinerea 44.60 0.00e+00 695.00
IUUC-Bdi-015028 Brachypodium distachyon 56.10 0.00e+00 940.00
IUUC-Bol-016521 Brassica oleracea 54.81 0.00e+00 966.00
IUUC-Bra-017250 Brassica rapa 55.52 0.00e+00 981.00
IUUC-Cel-018690 Caenorhabditis elegans 33.60 2.00e-134 472.00
IUUC-Cja-019229 Callithrix jacchus 42.22 0.00e+00 697.00
IUUC-Cfa-020504 Canis familiaris 42.22 0.00e+00 686.00
IUUC-Cpo-021574 Cavia porcellus 42.84 0.00e+00 714.00
IUUC-Cre-022756 Chlamydomonas reinhardtii 49.61 2.00e-173 602.00
IUUC-Csa-023436 Chlorocebus sabaeus 42.76 0.00e+00 689.00
IUUC-Cin-025397 Ciona intestinalis 40.51 2.00e-155 541.00
IUUC-Csv-026194 Ciona savignyi 43.17 1.00e-124 439.00
IUUC-Cgl-026684 Colletotrichum gloeosporioides 42.11 0.00e+00 650.00
IUUC-Cne-027031 Cryptococcus neoformans 43.87 0.00e+00 743.00
IUUC-Cme-027276 Cyanidioschyzon merolae 30.76 8.00e-70 258.00
IUUC-Dre-027514 Danio rerio 42.57 0.00e+00 689.00
IUUC-Dno-029191 Dasypus novemcinctus 42.34 1.00e-175 609.00
IUUC-Dor-030149 Dipodomys ordii 42.66 0.00e+00 707.00
IUUC-Dse-031260 Dothistroma septosporum 42.83 4.00e-132 464.00
IUUC-Dme-032043 Drosophila melanogaster 36.56 9.00e-165 573.00
IUUC-Ete-033102 Echinops telfairi 48.09 2.00e-138 485.00
IUUC-Eca-033223 Equus caballus 42.78 0.00e+00 708.00
IUUC-Fca-035795 Felis catus 39.96 0.00e+00 637.00
IUUC-Fal-036830 Ficedula albicollis 42.34 0.00e+00 700.00
IUUC-Fox-037835 Fusarium oxysporum 42.77 0.00e+00 673.00
IUUC-Fso-038324 Fusarium solani 43.17 0.00e+00 684.00
IUUC-Gmo-039355 Gadus morhua 42.48 0.00e+00 698.00
IUUC-Ggr-039840 Gaeumannomyces graminis 42.86 0.00e+00 650.00
IUUC-Gga-040907 Gallus gallus 48.39 4.00e-144 504.00
IUUC-Gac-042624 Gasterosteus aculeatus 41.76 0.00e+00 684.00
IUUC-Gma-043559 Glycine max 55.89 0.00e+00 1000.00
IUUC-Hsa-046145 Homo sapiens 42.89 0.00e+00 707.00
IUUC-Hvu-047416 Hordeum vulgare 56.88 0.00e+00 943.00
IUUC-Itr-049083 Ictidomys tridecemlineatus 42.34 0.00e+00 702.00
IUUC-Kpa-049150 Komagataella pastoris 43.55 0.00e+00 677.00
IUUC-Lch-049460 Latimeria chalumnae 40.78 3.00e-170 592.00
IUUC-Lpe-050840 Leersia perrieri 55.94 0.00e+00 954.00
IUUC-Loc-052733 Lepisosteus oculatus 43.20 0.00e+00 711.00
IUUC-Lma-053277 Leptosphaeria maculans 44.70 0.00e+00 720.00
IUUC-Laf-054294 Loxodonta africana 43.73 0.00e+00 691.00
IUUC-Mcc-054624 Macaca mulatta 42.78 0.00e+00 706.00
IUUC-Meu-056665 Macropus eugenii 42.90 6.00e-82 297.00
IUUC-Mor-057288 Magnaporthe oryzae 42.56 0.00e+00 662.00
IUUC-Mpo-057594 Magnaporthe poae 42.64 0.00e+00 643.00
IUUC-Mtr-058700 Medicago truncatula 58.11 0.00e+00 1022.00
IUUC-Mla-058846 Melampsora laricipopulina 43.51 0.00e+00 704.00
IUUC-Mga-059207 Meleagris gallopavo 39.93 7.00e-178 617.00
IUUC-Mvi-060327 Microbotryum violaceum 46.21 0.00e+00 775.00
IUUC-Mmr-061264 Microcebus murinus 43.13 0.00e+00 684.00
IUUC-Mdo-062327 Monodelphis domestica 42.19 0.00e+00 686.00
IUUC-Mmu-063542 Mus musculus 43.08 0.00e+00 696.00
IUUC-Mac-065142 Musa acuminata 58.30 0.00e+00 989.00
IUUC-Mpu-066098 Mustela putorius furo 42.41 7.00e-176 610.00
IUUC-Mlu-067056 Myotis lucifugus 39.25 4.00e-167 581.00
IUUC-Nfi-068323 Neosartorya fischeri 44.87 0.00e+00 734.00
IUUC-Ncr-068925 Neurospora crassa 42.59 0.00e+00 696.00
IUUC-Nle-068970 Nomascus leucogenys 42.71 0.00e+00 706.00
IUUC-Opr-070966 Ochotona princeps 53.80 7.00e-102 363.00
IUUC-Ont-071252 Oreochromis niloticus 42.31 0.00e+00 697.00
IUUC-Oan-072737 Ornithorhynchus anatinus 41.02 0.00e+00 659.00
IUUC-Oba-075794 Oryza barthii 55.61 0.00e+00 923.00
IUUC-Obr-076617 Oryza brachyantha 55.66 0.00e+00 953.00
IUUC-Ogl-077022 Oryza glaberrima 56.67 0.00e+00 961.00
IUUC-Ogu-078757 Oryza glumaepatula 59.81 7.00e-140 490.00
IUUC-Oin-079813 Oryza indica 56.33 0.00e+00 955.00
IUUC-Olo-080265 Oryza longistaminata 56.11 0.00e+00 955.00
IUUC-Ome-081494 Oryza meridionalis 56.33 0.00e+00 955.00
IUUC-Oni-082639 Oryza nivara 59.57 7.00e-139 487.00
IUUC-Opu-084005 Oryza punctata 56.33 0.00e+00 957.00
IUUC-Oru-084883 Oryza rufipogon 59.57 1.00e-139 489.00
IUUC-Osa-086158 Oryza sativa 56.45 0.00e+00 959.00
IUUC-Ola-086822 Oryzias latipes 43.18 0.00e+00 700.00
IUUC-Olu-087741 Ostreococcus lucimarinus 30.53 3.00e-19 87.00
IUUC-Oga-088887 Otolemur garnettii 43.20 0.00e+00 689.00
IUUC-Oar-090110 Ovis aries 41.13 0.00e+00 637.00
IUUC-Pan-092808 Papio anubis 43.35 0.00e+00 712.00
IUUC-Psi-093954 Pelodiscus sinensis 43.80 0.00e+00 710.00
IUUC-Pno-094922 Phaeosphaeria nodorum 45.08 0.00e+00 733.00
IUUC-Pfo-097175 Poecilia formosa 43.37 0.00e+00 716.00
IUUC-Pab-098155 Pongo abelii 42.95 0.00e+00 709.00
IUUC-Pop-099635 Populus trichocarpa 57.03 0.00e+00 1015.00
IUUC-Pca-100947 Procavia capensis 40.59 0.00e+00 663.00
IUUC-Ppe-101552 Prunus persica 58.14 0.00e+00 1025.00
IUUC-Pva-102744 Pteropus vampyrus 38.96 3.00e-167 582.00
IUUC-Pgr-103389 Puccinia graminis 41.78 0.00e+00 670.00
IUUC-Ptt-103953 Puccinia triticina 37.88 1.00e-158 553.00
IUUC-Pte-104079 Pyrenophora teres 45.42 0.00e+00 726.00
IUUC-Pyt-104656 Pyrenophora triticirepentis 45.19 0.00e+00 724.00
IUUC-Rno-105502 Rattus norvegicus 43.15 0.00e+00 718.00
IUUC-Sce-106390 Saccharomyces cerevisiae 44.99 0.00e+00 724.00
IUUC-Sha-107264 Sarcophilus harrisii 40.50 2.00e-84 305.00
IUUC-Sja-107674 Schizosaccharomyces japonicus 42.76 0.00e+00 729.00
IUUC-Spo-108348 Schizosaccharomyces pombe 44.03 0.00e+00 729.00
IUUC-Smo-108982 Selaginella moellendorffii 60.11 0.00e+00 1031.00
IUUC-Sit-110304 Setaria italica 56.93 0.00e+00 980.00
IUUC-Sly-111620 Solanum lycopersicum 64.63 0.00e+00 750.00
IUUC-Stu-112877 Solanum tuberosum 57.88 0.00e+00 1039.00
IUUC-Sbi-114702 Sorghum bicolor 57.22 0.00e+00 961.00
IUUC-Sre-115129 Sporisorium reilianum 44.10 0.00e+00 710.00
IUUC-Ssc-115931 Sus scrofa 42.42 3.00e-90 324.00
IUUC-Tgu-116787 Taeniopygia guttata 42.03 0.00e+00 705.00
IUUC-Tru-118218 Takifugu rubripes 43.04 0.00e+00 709.00
IUUC-Tsy-119401 Tarsius syrichta 46.00 1.00e-114 406.00
IUUC-Tni-120046 Tetraodon nigroviridis 42.94 0.00e+00 679.00
IUUC-Tca-121685 Theobroma cacao 57.37 0.00e+00 1022.00
IUUC-Tre-122154 Trichoderma reesei 42.99 0.00e+00 701.00
IUUC-Tvi-122451 Trichoderma virens 42.53 0.00e+00 696.00
IUUC-Tae-125397 Triticum aestivum 62.19 8.00e-168 583.00
IUUC-Tur-126650 Triticum urartu 57.84 0.00e+00 895.00
IUUC-Tme-127005 Tuber melanosporum 45.42 0.00e+00 725.00
IUUC-Tbe-128102 Tupaia belangeri 43.98 5.00e-127 447.00
IUUC-Ttr-128259 Tursiops truncatus 42.82 0.00e+00 680.00
IUUC-Uma-129511 Ustilago maydis 43.56 0.00e+00 687.00
IUUC-Vda-129833 Verticillium dahliae 40.18 1.00e-179 622.00
IUUC-Vvi-131572 Vitis vinifera 56.68 0.00e+00 984.00
IUUC-Xtr-131776 Xenopus tropicalis 34.02 5.00e-56 211.00
IUUC-Xma-133887 Xiphophorus maculatus 43.37 0.00e+00 704.00
IUUC-Yli-134427 Yarrowia lipolytica 43.90 0.00e+00 715.00
IUUC-Zma-135980 Zea mays 56.53 0.00e+00 947.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved