iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112877

Ensembl Protein ID

PGSC0003DMT400014538

UniProt Accession

M1A4E9; M1A4E9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005691	PGSC0003DMT400014537	PGSC0003DMT400014537
PGSC0003DMG400005691	PGSC0003DMT400014538	PGSC0003DMT400014538

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-32	110.4	507	541
UBD/Beta-Prp	5.70e-60	204.3	341	593

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v++l f ++  +l+s+s+D+t+++WD+ +g
   Q: 507  GHEGPVHGLVFsPTnATLASSSWDKTVRLWDVFDG 541
           8***********555779*************9777 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           it   f + +++l+ g+++ g + vw++++++++ + +gh   v+++ +spd+++ +tgs+D+ ikvw +s+g c++t+++h+d v++l
   Q: 341  ITTAVFNDLGNWLTFGCARlGQLLVWEWKSESYILKQQGHYFDVNCLAYSPDSQLVATGSDDNKIKVWTVSSGFCFVTFSEHTDAVTAL 429
           666778889999*9999765999****************************************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsf 188
           +f+p ++ l+s+s d t+r wdl  +  ++++ +++++   +++ +++g ++ +G+lD++ + +W++ktg+ll+ l+g h+++v+ l f
   Q: 430  HFMPGNHCLLSASLDGTVRAWDLLRYRNFKTFTTPTSKQFVSLAADQSGEVICAGTLDSFeIFVWSMKTGRLLDILSG-HEGPVHGLVF 517
           ****99************************999999999*******************965****************9.********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +++   l+s s d+tv+lwd+  g+  ++   ht  v+ v   p+++ l++ + Dg i +Wd   g l+ t+++++
   Q: 518  SPTNATLASSSWDKTVRLWDVFDGKGAVETFPHTHDVLTVVYRPDGKQLACSTLDGHIHFWDPIEGLLMYTIEGRR 593
           **************************************************************87777777776665 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGNALV VNNSLLISPI GNRVAVTDLI KSETITLPSQ SSTNLRRIAA 60
SPDGVFLLAI DENNRCLFIN LLRRAVLHRI TFKHPVAAAK FSPDGQLIAV AAGKLLQIWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATTTTTA GGGTTTAAGA AACGCCCATC TTCTTGCAGG GTTTAAGAAA GGCCTCGTTT 60
TGAGCTACTC TCGCCATTGT CTTCGTTCTT ACACTCTCTG CAAGTACTGC ATAGCCATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

KEGG

sot:102587545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	42.19	0.00e+00	721.00
IUUC-Atr-003033	Amborella trichopoda	66.24	0.00e+00	1198.00
IUUC-Apl-003219	Anas platyrhynchos	41.86	0.00e+00	726.00
IUUC-Aca-004950	Anolis carolinensis	42.71	0.00e+00	734.00
IUUC-Aly-006213	Arabidopsis lyrata	72.53	0.00e+00	1308.00
IUUC-Ath-006593	Arabidopsis thaliana	70.82	0.00e+00	1291.00
IUUC-Ago-007916	Ashbya gossypii	40.99	0.00e+00	698.00
IUUC-Acl-008225	Aspergillus clavatus	42.34	0.00e+00	741.00
IUUC-Afl-008390	Aspergillus flavus	42.45	0.00e+00	749.00
IUUC-Afu-009039	Aspergillus fumigatus	43.47	0.00e+00	748.00
IUUC-Ani-009228	Aspergillus nidulans	39.93	0.00e+00	637.00
IUUC-Ang-009663	Aspergillus niger	42.79	0.00e+00	723.00
IUUC-Aor-009923	Aspergillus oryzae	42.45	0.00e+00	749.00
IUUC-Ate-010264	Aspergillus terreus	43.54	0.00e+00	755.00
IUUC-Ame-010790	Astyanax mexicanus	34.17	1.00e-69	255.00
IUUC-Bgr-012066	Blumeria graminis	41.24	0.00e+00	723.00
IUUC-Bta-012399	Bos taurus	42.32	0.00e+00	711.00
IUUC-Bci-013757	Botrytis cinerea	42.76	0.00e+00	702.00
IUUC-Bdi-015028	Brachypodium distachyon	70.64	0.00e+00	1246.00
IUUC-Bol-016521	Brassica oleracea	69.73	0.00e+00	1256.00
IUUC-Bra-017250	Brassica rapa	70.26	0.00e+00	1299.00
IUUC-Cel-018690	Caenorhabditis elegans	32.97	3.00e-140	491.00
IUUC-Cja-019229	Callithrix jacchus	42.71	0.00e+00	725.00
IUUC-Cfa-020504	Canis familiaris	42.30	0.00e+00	720.00
IUUC-Cpo-021574	Cavia porcellus	42.67	0.00e+00	741.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	51.80	0.00e+00	664.00
IUUC-Csa-023436	Chlorocebus sabaeus	42.95	0.00e+00	709.00
IUUC-Cin-025397	Ciona intestinalis	41.40	3.00e-159	554.00
IUUC-Csv-026194	Ciona savignyi	46.86	5.00e-140	490.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	40.84	0.00e+00	683.00
IUUC-Cne-027031	Cryptococcus neoformans	42.97	0.00e+00	774.00
IUUC-Cme-027276	Cyanidioschyzon merolae	31.78	8.00e-113	400.00
IUUC-Dre-027514	Danio rerio	42.35	0.00e+00	710.00
IUUC-Dno-029191	Dasypus novemcinctus	44.16	0.00e+00	661.00
IUUC-Dor-030149	Dipodomys ordii	41.49	0.00e+00	716.00
IUUC-Dse-031260	Dothistroma septosporum	44.37	1.00e-144	505.00
IUUC-Dme-032043	Drosophila melanogaster	38.08	4.00e-172	597.00
IUUC-Ete-033102	Echinops telfairi	48.36	2.00e-154	538.00
IUUC-Eca-033223	Equus caballus	42.59	0.00e+00	728.00
IUUC-Fca-035795	Felis catus	39.45	0.00e+00	659.00
IUUC-Fal-036830	Ficedula albicollis	42.60	0.00e+00	727.00
IUUC-Fox-037835	Fusarium oxysporum	45.38	7.00e-158	550.00
IUUC-Fso-038324	Fusarium solani	45.63	5.00e-160	557.00
IUUC-Gmo-039355	Gadus morhua	41.48	0.00e+00	713.00
IUUC-Ggr-039840	Gaeumannomyces graminis	40.51	0.00e+00	646.00
IUUC-Gga-040907	Gallus gallus	49.26	2.00e-158	551.00
IUUC-Gac-042624	Gasterosteus aculeatus	41.55	0.00e+00	710.00
IUUC-Gma-043034	Glycine max	75.64	0.00e+00	1434.00
IUUC-Hsa-046327	Homo sapiens	42.62	0.00e+00	730.00
IUUC-Hvu-047416	Hordeum vulgare	71.65	0.00e+00	1249.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	42.73	0.00e+00	733.00
IUUC-Kpa-049150	Komagataella pastoris	41.03	0.00e+00	675.00
IUUC-Lch-049460	Latimeria chalumnae	41.25	0.00e+00	628.00
IUUC-Lpe-050840	Leersia perrieri	71.46	0.00e+00	1272.00
IUUC-Loc-052733	Lepisosteus oculatus	41.08	0.00e+00	721.00
IUUC-Lma-053277	Leptosphaeria maculans	46.23	1.00e-167	582.00
IUUC-Laf-054294	Loxodonta africana	43.36	0.00e+00	706.00
IUUC-Mcc-054624	Macaca mulatta	42.51	0.00e+00	729.00
IUUC-Meu-056665	Macropus eugenii	39.01	9.00e-131	459.00
IUUC-Mor-057288	Magnaporthe oryzae	46.66	1.00e-162	565.00
IUUC-Mpo-057594	Magnaporthe poae	40.49	0.00e+00	653.00
IUUC-Mtr-058700	Medicago truncatula	78.32	0.00e+00	1465.00
IUUC-Mla-058846	Melampsora laricipopulina	42.68	0.00e+00	715.00
IUUC-Mga-059207	Meleagris gallopavo	38.39	0.00e+00	631.00
IUUC-Mvi-060327	Microbotryum violaceum	44.75	0.00e+00	799.00
IUUC-Mmr-061264	Microcebus murinus	42.84	0.00e+00	705.00
IUUC-Mdo-062327	Monodelphis domestica	42.67	0.00e+00	716.00
IUUC-Mmu-063542	Mus musculus	41.23	0.00e+00	706.00
IUUC-Mac-065142	Musa acuminata	72.89	0.00e+00	1338.00
IUUC-Mpu-066098	Mustela putorius furo	42.86	0.00e+00	637.00
IUUC-Mlu-067056	Myotis lucifugus	39.33	2.00e-178	618.00
IUUC-Nfi-068323	Neosartorya fischeri	43.11	0.00e+00	746.00
IUUC-Ncr-068925	Neurospora crassa	40.71	0.00e+00	707.00
IUUC-Nle-068970	Nomascus leucogenys	42.41	0.00e+00	728.00
IUUC-Opr-070966	Ochotona princeps	54.60	1.00e-106	379.00
IUUC-Ont-071252	Oreochromis niloticus	41.95	0.00e+00	733.00
IUUC-Oan-072737	Ornithorhynchus anatinus	41.31	0.00e+00	694.00
IUUC-Oba-075794	Oryza barthii	69.91	0.00e+00	1238.00
IUUC-Obr-076617	Oryza brachyantha	71.54	0.00e+00	1286.00
IUUC-Ogl-077022	Oryza glaberrima	71.54	0.00e+00	1288.00
IUUC-Ogu-078757	Oryza glumaepatula	59.13	0.00e+00	981.00
IUUC-Oin-079813	Oryza indica	71.99	0.00e+00	1287.00
IUUC-Olo-080265	Oryza longistaminata	71.88	0.00e+00	1286.00
IUUC-Ome-081494	Oryza meridionalis	71.76	0.00e+00	1288.00
IUUC-Oni-082639	Oryza nivara	59.02	0.00e+00	975.00
IUUC-Opu-084005	Oryza punctata	72.43	0.00e+00	1300.00
IUUC-Oru-084883	Oryza rufipogon	58.91	0.00e+00	977.00
IUUC-Osa-086158	Oryza sativa	71.88	0.00e+00	1286.00
IUUC-Ola-086822	Oryzias latipes	41.99	0.00e+00	726.00
IUUC-Oga-088887	Otolemur garnettii	42.35	0.00e+00	708.00
IUUC-Oar-090110	Ovis aries	40.84	0.00e+00	672.00
IUUC-Pan-092808	Papio anubis	42.78	0.00e+00	740.00
IUUC-Psi-093954	Pelodiscus sinensis	43.10	0.00e+00	735.00
IUUC-Pno-094922	Phaeosphaeria nodorum	46.23	7.00e-169	586.00
IUUC-Ppa-095678	Physcomitrella patens	57.58	0.00e+00	989.00
IUUC-Pfo-097175	Poecilia formosa	43.00	0.00e+00	752.00
IUUC-Pab-098155	Pongo abelii	42.33	0.00e+00	729.00
IUUC-Pop-099635	Populus trichocarpa	78.66	0.00e+00	1431.00
IUUC-Pca-100947	Procavia capensis	40.53	0.00e+00	675.00
IUUC-Ppe-101552	Prunus persica	79.66	0.00e+00	1505.00
IUUC-Pva-102744	Pteropus vampyrus	39.35	4.00e-179	620.00
IUUC-Pgr-103389	Puccinia graminis	42.64	0.00e+00	712.00
IUUC-Ptt-103953	Puccinia triticina	36.87	5.00e-161	560.00
IUUC-Pte-104079	Pyrenophora teres	46.23	2.00e-165	575.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	46.39	8.00e-167	579.00
IUUC-Rno-105502	Rattus norvegicus	41.53	0.00e+00	725.00
IUUC-Sce-106390	Saccharomyces cerevisiae	42.03	0.00e+00	725.00
IUUC-Sha-107264	Sarcophilus harrisii	42.79	7.00e-95	339.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	41.17	0.00e+00	729.00
IUUC-Spo-108348	Schizosaccharomyces pombe	41.22	0.00e+00	713.00
IUUC-Smo-108982	Selaginella moellendorffii	62.12	0.00e+00	1122.00
IUUC-Sit-110304	Setaria italica	72.17	0.00e+00	1319.00
IUUC-Sly-111620	Solanum lycopersicum	98.22	0.00e+00	1152.00
IUUC-Sbi-114702	Sorghum bicolor	71.99	0.00e+00	1304.00
IUUC-Sre-115129	Sporisorium reilianum	45.23	0.00e+00	758.00
IUUC-Ssc-115931	Sus scrofa	45.20	2.00e-100	357.00
IUUC-Tgu-116787	Taeniopygia guttata	42.29	0.00e+00	726.00
IUUC-Tru-118218	Takifugu rubripes	42.23	0.00e+00	726.00
IUUC-Tsy-119401	Tarsius syrichta	47.32	2.00e-126	446.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.34	0.00e+00	686.00
IUUC-Tca-121685	Theobroma cacao	77.93	0.00e+00	1477.00
IUUC-Tre-122154	Trichoderma reesei	40.95	0.00e+00	711.00
IUUC-Tvi-122451	Trichoderma virens	45.31	2.00e-166	578.00
IUUC-Tae-125397	Triticum aestivum	76.45	0.00e+00	750.00
IUUC-Tur-126650	Triticum urartu	73.00	0.00e+00	1191.00
IUUC-Tme-127005	Tuber melanosporum	42.36	0.00e+00	717.00
IUUC-Tbe-128102	Tupaia belangeri	42.22	1.00e-125	442.00
IUUC-Ttr-128259	Tursiops truncatus	42.60	0.00e+00	701.00
IUUC-Uma-129511	Ustilago maydis	45.37	0.00e+00	766.00
IUUC-Vda-129833	Verticillium dahliae	38.93	4.00e-180	624.00
IUUC-Vvi-131572	Vitis vinifera	77.59	0.00e+00	1428.00
IUUC-Xtr-131776	Xenopus tropicalis	35.97	1.00e-62	233.00
IUUC-Xma-133887	Xiphophorus maculatus	42.65	0.00e+00	731.00
IUUC-Yli-134427	Yarrowia lipolytica	42.41	0.00e+00	704.00
IUUC-Zma-135980	Zea mays	71.56	0.00e+00	1265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence