iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131493

Ensembl Protein ID

VIT_04s0008g06230.t01

UniProt Accession

F6H3W0; F6H3W0_VITVI

Genbank Protein ID

CCB46849.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

VIT_04s0008g06230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g06230	VIT_04s0008g06230.t01	VIT_04s0008g06230.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	6.40e-20	71.4	24	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +++++ktl++++++l+v++ + v +lKe+ia+++gv  eqq+LI  G++LkDd+ Ls+++++dg+++hlvv+++
   Q: 24   VEIKIKTLDSQTYTLRVDKCMPVPALKEQIASVTGVLSEQQRLICRGRVLKDDQLLSAYHVEDGHTLHLVVRQP 97
           589********************************************************************985 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGSTGGDEVM ISGSGEAQCS EATVEIKIKT LDSQTYTLRV DKCMPVPALK EQIASVTGVL 60
SEQQRLICRG RVLKDDQLLS AYHVEDGHTL HLVVRQPFPP SSESLPDNSA TDPASNTLRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTCCTCTC TCTCTCTGCC TGGAACTCCC GCAGGTCTCT CTCATCTCTC TCTCTCTCTG 60
TTGATGCCAA TTTCAGCATC GGAATCGAAT AGATCATTCT TGTGTTTGTC TTTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002841	Amborella trichopoda	53.02	2.00e-108	385.00
IUUC-Ath-006772	Arabidopsis thaliana	44.48	6.00e-105	374.00
IUUC-Bdi-015055	Brachypodium distachyon	38.65	3.00e-91	328.00
IUUC-Bol-015630	Brassica oleracea	43.15	7.00e-101	360.00
IUUC-Bra-017052	Brassica rapa	42.71	6.00e-108	384.00
IUUC-Hvu-047698	Hordeum vulgare	39.34	5.00e-93	334.00
IUUC-Lpe-051647	Leersia perrieri	41.51	3.00e-78	285.00
IUUC-Mac-064984	Musa acuminata	42.49	4.00e-94	338.00
IUUC-Oba-075736	Oryza barthii	38.02	3.00e-94	338.00
IUUC-Obr-076574	Oryza brachyantha	45.32	5.00e-88	317.00
IUUC-Ogl-077678	Oryza glaberrima	38.02	3.00e-94	338.00
IUUC-Ogu-078952	Oryza glumaepatula	38.02	5.00e-94	338.00
IUUC-Oin-079943	Oryza indica	42.53	2.00e-66	246.00
IUUC-Ome-081937	Oryza meridionalis	45.05	1.00e-83	303.00
IUUC-Oni-082471	Oryza nivara	38.06	2.00e-94	339.00
IUUC-Opu-083366	Oryza punctata	38.32	1.00e-97	349.00
IUUC-Oru-085170	Oryza rufipogon	38.02	5.00e-94	338.00
IUUC-Olu-087872	Ostreococcus lucimarinus	47.06	1.00e-09	57.40
IUUC-Ppa-095346	Physcomitrella patens	43.56	2.00e-61	230.00
IUUC-Spo-108223	Schizosaccharomyces pombe	33.56	3.00e-15	75.10
IUUC-Smo-108818	Selaginella moellendorffii	39.17	2.00e-58	219.00
IUUC-Sit-110231	Setaria italica	38.80	6.00e-83	301.00
IUUC-Sly-111426	Solanum lycopersicum	53.48	5.00e-170	590.00
IUUC-Stu-112355	Solanum tuberosum	51.57	3.00e-111	394.00
IUUC-Sbi-114712	Sorghum bicolor	40.39	9.00e-81	293.00
IUUC-Tae-125205	Triticum aestivum	38.11	9.00e-90	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence