iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114043

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G168900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g023050	Sb09g023050.1	Sb09g023050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.60e-08	33.2	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC + +   ++ ++vlp CgH+fh dC+ +w       + + +CPlCr
   Q: 144  CSICISALvagEK-VKVLPpCGHCFHPDCVDAW------LRSQPSCPLCR 186
           ****999988555.999988*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAQETAAGT GGGAPQVVTR WRYGDVGDSN FAVHGRAVPL LVGLLCAIVF FVALCLYLRW 60
RCHRYAPADD DPEAGDASSS SAAAASLPGL DADAIRRLPV TLYRPPAAMP PPSAPRLAVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCGC AGGAGACCGC CGCGGGCACC GGCGGCGGGG CCCCGCAGGT GGTGACGCGG 60
TGGCGGTACG GGGACGTGGG CGACAGCAAC TTCGCGGTGC ACGGCCGCGC GGTGCCGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g023050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006564	Arabidopsis lyrata	32.09	1.00e-19	88.20
IUUC-Bdi-014150	Brachypodium distachyon	57.81	2.00e-31	127.00
IUUC-Hvu-047069	Hordeum vulgare	61.38	5.00e-28	116.00
IUUC-Lpe-051280	Leersia perrieri	63.48	2.00e-31	127.00
IUUC-Ogl-076978	Oryza glaberrima	61.78	1.00e-37	148.00
IUUC-Ogu-077974	Oryza glumaepatula	61.78	7.00e-38	149.00
IUUC-Oin-079335	Oryza indica	61.26	1.00e-35	141.00
IUUC-Ome-081185	Oryza meridionalis	61.78	4.00e-37	146.00
IUUC-Oni-082707	Oryza nivara	61.26	1.00e-35	141.00
IUUC-Opu-083843	Oryza punctata	64.06	1.00e-37	148.00
IUUC-Oru-084258	Oryza rufipogon	64.40	1.00e-37	148.00
IUUC-Osa-085429	Oryza sativa	61.78	8.00e-38	149.00
IUUC-Sit-109723	Setaria italica	69.47	9.00e-55	205.00
IUUC-Tae-124416	Triticum aestivum	61.90	1.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence