iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099807

Ensembl Protein ID

POPTR_0005s23680.1

UniProt Accession

U5GGT6; U5GGT6_POPTR

Genbank Protein ID

ERP61474.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_651820; POPTR_0005s23680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s23680	POPTR_0005s23680.1	POPTR_0005s23680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-10	39.6	3341	3378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+++tcl+   +  l+vsGsdD+t+ +WDl++ v +
   Q: 3341 GHTAKITCLHVsqPYMLIVSGSDDCTVILWDLSSLVFV 3378
           8**********7554779*************9887765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKCRDRHELE LDFKRFWEEF RSSSSEKEKE MALNWTIDAF CRLVKQHANV AQLVTMLVET 60
HIFSFVVGRA FVTDIDKLKI GSKTRSLDVE KVLRFFSEVT KDGIGPGSNL LTAVEALVSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATGCA GAGATCGACA TGAATTGGAA TTGGACTTCA AGAGATTTTG GGAGGAGTTC 60
CGCTCATCCA GTTCCGAAAA GGTTCTCGAT TCCCATCTTT TGTGTGCTAT TTCATTACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

KEGG

pop:POPTR_0005s23680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000317	Aegilops tauschii	67.21	0.00e+00	4567.00
IUUC-Aml-002094	Ailuropoda melanoleuca	37.44	6.00e-177	616.00
IUUC-Atr-002879	Amborella trichopoda	71.38	0.00e+00	4870.00
IUUC-Apl-003581	Anas platyrhynchos	37.23	1.00e-174	608.00
IUUC-Aca-005386	Anolis carolinensis	37.82	2.00e-175	610.00
IUUC-Aly-005640	Arabidopsis lyrata	75.58	0.00e+00	5261.00
IUUC-Ath-007645	Arabidopsis thaliana	75.69	0.00e+00	5264.00
IUUC-Ame-011607	Astyanax mexicanus	42.62	2.00e-169	591.00
IUUC-Bta-012997	Bos taurus	37.71	1.00e-176	614.00
IUUC-Bci-013784	Botrytis cinerea	38.10	3.00e-135	477.00
IUUC-Bdi-015031	Brachypodium distachyon	68.30	0.00e+00	4609.00
IUUC-Bol-016148	Brassica oleracea	74.72	0.00e+00	5164.00
IUUC-Bra-017449	Brassica rapa	74.06	0.00e+00	5105.00
IUUC-Cja-019272	Callithrix jacchus	37.63	5.00e-177	616.00
IUUC-Cfa-020073	Canis familiaris	37.54	7.00e-177	615.00
IUUC-Cpo-021455	Cavia porcellus	37.34	1.00e-179	625.00
IUUC-Csa-023097	Chlorocebus sabaeus	37.85	1.00e-179	624.00
IUUC-Cin-025176	Ciona intestinalis	27.72	5.00e-13	68.20
IUUC-Cgl-026670	Colletotrichum gloeosporioides	39.33	1.00e-121	431.00
IUUC-Dre-027703	Danio rerio	41.52	6.00e-173	602.00
IUUC-Dno-028965	Dasypus novemcinctus	39.16	4.00e-137	483.00
IUUC-Dme-031959	Drosophila melanogaster	37.33	9.00e-168	585.00
IUUC-Ete-032373	Echinops telfairi	46.30	1.00e-123	438.00
IUUC-Eca-033575	Equus caballus	37.56	1.00e-176	614.00
IUUC-Eeu-034853	Erinaceus europaeus	65.53	6.00e-81	297.00
IUUC-Fca-036304	Felis catus	37.30	2.00e-174	607.00
IUUC-Fal-037019	Ficedula albicollis	37.41	2.00e-176	614.00
IUUC-Fox-038015	Fusarium oxysporum	37.66	2.00e-131	463.00
IUUC-Fso-038249	Fusarium solani	37.11	2.00e-129	457.00
IUUC-Gmo-039503	Gadus morhua	41.46	1.00e-168	588.00
IUUC-Ggr-039900	Gaeumannomyces graminis	36.15	5.00e-141	496.00
IUUC-Gga-041220	Gallus gallus	38.61	5.00e-139	490.00
IUUC-Gac-041618	Gasterosteus aculeatus	37.07	4.00e-173	603.00
IUUC-Gma-042724	Glycine max	78.92	0.00e+00	5423.00
IUUC-Ggo-044679	Gorilla gorilla	35.28	6.00e-161	563.00
IUUC-Hsa-046586	Homo sapiens	37.49	3.00e-180	627.00
IUUC-Hvu-047814	Hordeum vulgare	68.65	0.00e+00	4682.00
IUUC-Itr-048396	Ictidomys tridecemlineatus	37.54	1.00e-174	608.00
IUUC-Lch-049803	Latimeria chalumnae	37.17	9.00e-134	471.00
IUUC-Lpe-050828	Leersia perrieri	68.14	0.00e+00	4640.00
IUUC-Loc-052434	Lepisosteus oculatus	36.62	3.00e-170	593.00
IUUC-Lma-053017	Leptosphaeria maculans	34.58	1.00e-122	435.00
IUUC-Laf-054408	Loxodonta africana	37.35	1.00e-171	598.00
IUUC-Mcc-055652	Macaca mulatta	37.85	3.00e-176	613.00
IUUC-Meu-056743	Macropus eugenii	55.99	1.00e-117	419.00
IUUC-Mor-057120	Magnaporthe oryzae	37.64	4.00e-143	503.00
IUUC-Mtr-058732	Medicago truncatula	78.14	0.00e+00	5419.00
IUUC-Mla-058974	Melampsora laricipopulina	32.46	6.00e-132	466.00
IUUC-Mvi-060546	Microbotryum violaceum	31.96	3.00e-132	467.00
IUUC-Mmr-061760	Microcebus murinus	36.17	3.00e-158	554.00
IUUC-Mdo-062645	Monodelphis domestica	37.09	1.00e-173	605.00
IUUC-Mmu-063588	Mus musculus	37.51	2.00e-179	624.00
IUUC-Mac-064872	Musa acuminata	63.75	0.00e+00	2629.00
IUUC-Mpu-066073	Mustela putorius furo	37.54	8.00e-177	615.00
IUUC-Mlu-067641	Myotis lucifugus	37.80	2.00e-176	614.00
IUUC-Nle-070009	Nomascus leucogenys	37.49	3.00e-180	627.00
IUUC-Opr-070689	Ochotona princeps	35.10	2.00e-150	528.00
IUUC-Ont-071427	Oreochromis niloticus	43.64	6.00e-174	606.00
IUUC-Oan-073118	Ornithorhynchus anatinus	33.37	9.00e-132	466.00
IUUC-Ocu-074702	Oryctolagus cuniculus	37.41	6.00e-176	612.00
IUUC-Oba-075831	Oryza barthii	68.47	0.00e+00	4675.00
IUUC-Obr-076728	Oryza brachyantha	68.69	0.00e+00	4697.00
IUUC-Ogl-077922	Oryza glaberrima	68.02	0.00e+00	4629.00
IUUC-Ogu-079001	Oryza glumaepatula	67.99	0.00e+00	4622.00
IUUC-Oin-079929	Oryza indica	77.89	0.00e+00	1003.00
IUUC-Olo-080662	Oryza longistaminata	67.96	0.00e+00	4621.00
IUUC-Ome-081733	Oryza meridionalis	68.82	0.00e+00	4512.00
IUUC-Oni-082641	Oryza nivara	67.96	0.00e+00	4620.00
IUUC-Opu-083564	Oryza punctata	67.59	0.00e+00	4617.00
IUUC-Oru-084403	Oryza rufipogon	67.96	0.00e+00	4623.00
IUUC-Osa-085957	Oryza sativa	68.32	6.00e-151	526.00
IUUC-Ola-086856	Oryzias latipes	43.70	9.00e-174	605.00
IUUC-Oga-088908	Otolemur garnettii	37.41	5.00e-172	598.00
IUUC-Oar-089625	Ovis aries	37.71	1.00e-176	614.00
IUUC-Ptr-091209	Pan troglodytes	37.49	4.00e-180	626.00
IUUC-Pan-092751	Papio anubis	37.60	4.00e-176	613.00
IUUC-Psi-092951	Pelodiscus sinensis	37.17	5.00e-172	599.00
IUUC-Ppa-095447	Physcomitrella patens	49.70	0.00e+00	3116.00
IUUC-Pfo-097102	Poecilia formosa	37.29	7.00e-174	605.00
IUUC-Pab-098485	Pongo abelii	37.39	1.00e-179	625.00
IUUC-Pca-100146	Procavia capensis	56.40	3.00e-108	388.00
IUUC-Ppe-101277	Prunus persica	81.22	0.00e+00	5577.00
IUUC-Pva-102502	Pteropus vampyrus	37.24	4.00e-174	606.00
IUUC-Rno-105592	Rattus norvegicus	37.69	2.00e-178	621.00
IUUC-Sha-106751	Sarcophilus harrisii	38.01	9.00e-177	615.00
IUUC-Spo-108108	Schizosaccharomyces pombe	34.14	3.00e-128	454.00
IUUC-Sit-110811	Setaria italica	68.64	0.00e+00	4351.00
IUUC-Sly-110936	Solanum lycopersicum	75.76	0.00e+00	5127.00
IUUC-Sbi-114421	Sorghum bicolor	66.75	0.00e+00	4479.00
IUUC-Sre-115137	Sporisorium reilianum	29.73	1.00e-115	411.00
IUUC-Ssc-116100	Sus scrofa	37.72	6.00e-178	619.00
IUUC-Tgu-117182	Taeniopygia guttata	37.35	3.00e-176	613.00
IUUC-Tru-117859	Takifugu rubripes	43.46	1.00e-174	608.00
IUUC-Tsy-119315	Tarsius syrichta	37.01	6.00e-170	592.00
IUUC-Tni-120784	Tetraodon nigroviridis	42.91	4.00e-170	593.00
IUUC-Tca-121423	Theobroma cacao	82.46	0.00e+00	5661.00
IUUC-Tre-121988	Trichoderma reesei	37.42	7.00e-136	479.00
IUUC-Tvi-122476	Trichoderma virens	36.59	9.00e-134	472.00
IUUC-Tur-126221	Triticum urartu	67.20	0.00e+00	4505.00
IUUC-Tbe-127827	Tupaia belangeri	35.86	2.00e-159	557.00
IUUC-Ttr-128368	Tursiops truncatus	37.66	4.00e-176	613.00
IUUC-Vda-129813	Verticillium dahliae	37.68	1.00e-130	461.00
IUUC-Vpa-130252	Vicugna pacos	37.65	0.00e+00	630.00
IUUC-Vvi-131663	Vitis vinifera	83.34	0.00e+00	3828.00
IUUC-Xtr-132689	Xenopus tropicalis	38.03	4.00e-172	600.00
IUUC-Xma-133750	Xiphophorus maculatus	38.34	2.00e-136	481.00
IUUC-Zma-135580	Zea mays	67.41	0.00e+00	4572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence