iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076330

Ensembl Protein ID

OB02G19220.1

UniProt Accession

J3LBA5; J3LBA5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G19220	OB02G19220.1	OB02G19220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.50e-77	259.9	439	743

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           Gl N gN+CY N+vLQcL+ +++l+ +ll   +++++      +++ +l+++l++  + l  ++ + vsp+++l+ l+++  ++ g +q+Da+Efl+
   Q: 439  GLFNCGNSCYANAVLQCLMCTKPLMIYLLLrLHSKDCC-----SKNWCLMCELEQYASTL-RESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLR 529
           9*************************999845555554.....5667**********999.9999******************************** PP
   S: 98   flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesf 194
           +l+ +++ ++                  l  e++ +   ++++li+++F+g+lks++kcl+c ++s+r+e+ +dl+l+++g  e    slqd+L +f
   Q: 530  HLVMSMQGAC---------------LDGLGGEKQVESSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVE----SLQDALTQF 607
           **********...............23566668899999******************************************997....8******** PP
   S: 195  tkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG... 288
           t++e l+gen+y+c +c ++++a+k+l+++++P++L++ LkRf    + ++  kink+v+fp++Ld+ pf+t   ++   +  Y L+avvvH     
   Q: 608  TAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF----QSGKYGKINKCVTFPDMLDMVPFVTGAGDN---PPLYFLYAVVVHVDten 697
           *******************************************....346678********************6654...9***********88542 PP
   S: 289  slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            + sGHY++yvk+ +g Wl++dDs+V++v+ ++v +   + aY+lfY+r
   Q: 698  ASFSGHYISYVKDMQGTWLRIDDSEVQVVSLNQVMS---EGAYMLFYMR 743
           3559********************************...********98 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MLQPRESDVP VLFVIFIVLP VIAYFLLGRW HDAVSKKARV SVLAQRAAEE TFKVETMATP 60
DVVLPGPALR PMPYLRSASS ARAEYHECAT CHGPAKTRCS RCKSVRYCSG KCQIIHWRQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCTTAGGT CAATCAGCAA TCTGGAATGA TTTTTCAATC TCAAGCAGGG AAATTTCGAA 60
GTTGGATGAT AATATTCTGT TAGGGACATG CTCCAACCAA GGGAATCTGA TGTGCCTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

obr:102708406

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	78.15	0.00e+00	1071.00
IUUC-Atr-003062	Amborella trichopoda	53.80	2.00e-153	535.00
IUUC-Aly-006034	Arabidopsis lyrata	55.95	6.00e-166	577.00
IUUC-Ath-007599	Arabidopsis thaliana	56.19	6.00e-166	577.00
IUUC-Bdi-014717	Brachypodium distachyon	82.74	0.00e+00	1565.00
IUUC-Bol-015616	Brassica oleracea	70.08	1.00e-160	559.00
IUUC-Bra-017955	Brassica rapa	55.15	2.00e-165	575.00
IUUC-Gma-043603	Glycine max	47.64	0.00e+00	736.00
IUUC-Hvu-047393	Hordeum vulgare	76.68	0.00e+00	820.00
IUUC-Lpe-051615	Leersia perrieri	90.48	0.00e+00	1688.00
IUUC-Mtr-058164	Medicago truncatula	47.52	0.00e+00	733.00
IUUC-Mac-064719	Musa acuminata	51.64	0.00e+00	824.00
IUUC-Oba-075960	Oryza barthii	88.11	0.00e+00	1645.00
IUUC-Ogl-077370	Oryza glaberrima	93.46	0.00e+00	1703.00
IUUC-Ogu-078615	Oryza glumaepatula	88.11	0.00e+00	1643.00
IUUC-Oin-079409	Oryza indica	93.71	0.00e+00	1409.00
IUUC-Olo-080550	Oryza longistaminata	84.93	0.00e+00	1456.00
IUUC-Ome-081508	Oryza meridionalis	87.61	0.00e+00	1667.00
IUUC-Oni-082740	Oryza nivara	88.01	0.00e+00	1641.00
IUUC-Opu-083669	Oryza punctata	86.61	0.00e+00	1566.00
IUUC-Oru-084502	Oryza rufipogon	88.01	0.00e+00	1641.00
IUUC-Osa-085475	Oryza sativa	93.35	0.00e+00	1699.00
IUUC-Pop-099882	Populus trichocarpa	60.35	0.00e+00	641.00
IUUC-Ppe-101942	Prunus persica	46.98	0.00e+00	755.00
IUUC-Sit-109825	Setaria italica	81.19	0.00e+00	1540.00
IUUC-Sly-111027	Solanum lycopersicum	55.41	0.00e+00	636.00
IUUC-Sbi-114225	Sorghum bicolor	80.31	0.00e+00	1506.00
IUUC-Tca-121618	Theobroma cacao	60.37	0.00e+00	659.00
IUUC-Tae-123144	Triticum aestivum	81.44	0.00e+00	1040.00
IUUC-Tur-126234	Triticum urartu	77.60	0.00e+00	1374.00
IUUC-Vvi-131600	Vitis vinifera	53.10	0.00e+00	687.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence