iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017074

Ensembl Protein ID

Bra022749.1-P

UniProt Accession

M4E1U9; M4E1U9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022749	Bra022749.1	Bra022749.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-13	49.0	478	501

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++ +d  ++ sGs D +i+v+D+r
   Q: 478  SWsPDgLYITSGSADPVIHVFDIR 501
           59999899**************76 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSELRKPISK RQEEEEDNNV GSREEQEQAL VALVEHRSAE TERLKHHISN YQAKLIEAER 60
SLRDSKAKLA NLRGHDDGVS VPSVSSAKKE NPLKTLRNVN DDESTKNFTP SRKDYPSPSP 120

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Nucleotide Sequence
(Fasta)

ATGAGCGAGC TTCGGAAACC CATATCGAAA AGACAAGAAG AAGAAGAAGA TAATAATGTC 60
GGTAGCAGAG AAGAGCAGGA ACAAGCCCTT GTCGCTTTAG TAGAGCACCG TTCAGCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	56.17	3.00e-131	461.00
IUUC-Atr-002878	Amborella trichopoda	60.62	1.00e-131	462.00
IUUC-Aly-006473	Arabidopsis lyrata	80.83	0.00e+00	820.00
IUUC-Ath-006806	Arabidopsis thaliana	80.87	0.00e+00	807.00
IUUC-Bdi-014216	Brachypodium distachyon	60.17	2.00e-128	452.00
IUUC-Bol-015463	Brassica oleracea	83.15	0.00e+00	900.00
IUUC-Gma-042665	Glycine max	59.74	0.00e+00	632.00
IUUC-Hvu-047292	Hordeum vulgare	64.08	2.00e-111	395.00
IUUC-Lpe-051627	Leersia perrieri	60.50	2.00e-134	472.00
IUUC-Mtr-058789	Medicago truncatula	56.24	3.00e-160	557.00
IUUC-Mac-065472	Musa acuminata	56.08	3.00e-163	568.00
IUUC-Oba-074995	Oryza barthii	59.32	1.00e-134	472.00
IUUC-Obr-076006	Oryza brachyantha	62.75	3.00e-134	471.00
IUUC-Ogl-077176	Oryza glaberrima	62.05	1.00e-137	483.00
IUUC-Ogu-078267	Oryza glumaepatula	62.05	1.00e-137	483.00
IUUC-Oin-079742	Oryza indica	61.77	1.00e-136	479.00
IUUC-Olo-080890	Oryza longistaminata	60.17	9.00e-125	439.00
IUUC-Ome-081454	Oryza meridionalis	61.77	2.00e-137	482.00
IUUC-Oni-083009	Oryza nivara	59.06	3.00e-134	471.00
IUUC-Opu-083781	Oryza punctata	61.13	4.00e-135	474.00
IUUC-Oru-084517	Oryza rufipogon	59.06	3.00e-134	471.00
IUUC-Osa-085484	Oryza sativa	61.77	1.00e-136	478.00
IUUC-Ppa-095859	Physcomitrella patens	42.22	6.00e-108	384.00
IUUC-Pop-099647	Populus trichocarpa	58.41	5.00e-173	600.00
IUUC-Ppe-101833	Prunus persica	60.48	1.00e-178	619.00
IUUC-Smo-109063	Selaginella moellendorffii	36.76	5.00e-42	164.00
IUUC-Sit-109887	Setaria italica	62.32	2.00e-135	475.00
IUUC-Sly-111601	Solanum lycopersicum	53.59	2.00e-169	588.00
IUUC-Stu-112708	Solanum tuberosum	62.93	8.00e-145	506.00
IUUC-Sbi-114727	Sorghum bicolor	61.19	7.00e-133	467.00
IUUC-Tca-121644	Theobroma cacao	61.22	2.00e-172	598.00
IUUC-Tae-125240	Triticum aestivum	61.88	1.00e-138	486.00
IUUC-Vvi-131460	Vitis vinifera	59.40	6.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence