iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095859

Ensembl Protein ID

PP1S80_25V6.1

UniProt Accession

A9SHP8; A9SHP8_PHYPA

Genbank Protein ID

EDQ69197.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544969

Gene Name

PHYPADRAFT_130046

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S80_25V6	PP1S80_25V6.1	PP1S80_25V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-11	43.2	447	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++ +d  + vsGs D +i+v+D+r
   Q: 447  SWsPDgLYAVSGSTDPKIHVFDIR 470
           69999899**************87 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASSLKRPRS HESSEVGEED DELVKLVRRR VGDVKKLVTD IKRKEIELAD AEAKLDHAVA 60
MLDQIRGKNG DRNHPASRHH EGVSNGANGL ADGEENALAS ASPAKKVATV NKTAGGSSAS 120

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Nucleotide Sequence
(Fasta)

AGGATTTGTG TATACTCAGG GGTGTCCATG GAGTCACATT TTTCCAGAAG TAGAGAATCC 60
CTAGGGCACG TCTGGATTGC TGAGCTTCCG TTTGCGCCCC TTATAGACAG CTGCTCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_130046

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	46.92	2.00e-98	352.00
IUUC-Atr-002878	Amborella trichopoda	45.23	8.00e-96	343.00
IUUC-Aly-006473	Arabidopsis lyrata	54.11	5.00e-111	394.00
IUUC-Ath-006806	Arabidopsis thaliana	44.60	1.00e-111	395.00
IUUC-Bdi-014216	Brachypodium distachyon	53.42	2.00e-99	355.00
IUUC-Bol-015463	Brassica oleracea	44.03	1.00e-115	409.00
IUUC-Bra-017074	Brassica rapa	41.58	6.00e-112	397.00
IUUC-Gma-042665	Glycine max	44.61	7.00e-117	413.00
IUUC-Hvu-047292	Hordeum vulgare	54.45	1.00e-86	312.00
IUUC-Lpe-051627	Leersia perrieri	51.27	2.00e-100	358.00
IUUC-Mtr-058789	Medicago truncatula	55.29	2.00e-103	369.00
IUUC-Mac-065472	Musa acuminata	43.08	2.00e-116	412.00
IUUC-Oba-074995	Oryza barthii	48.40	2.00e-96	345.00
IUUC-Obr-076006	Oryza brachyantha	54.35	3.00e-99	354.00
IUUC-Ogl-077176	Oryza glaberrima	51.13	4.00e-100	358.00
IUUC-Ogu-078267	Oryza glumaepatula	51.13	4.00e-100	357.00
IUUC-Oin-079742	Oryza indica	51.13	1.00e-99	355.00
IUUC-Olo-080890	Oryza longistaminata	49.14	2.00e-90	325.00
IUUC-Ome-081454	Oryza meridionalis	50.85	9.00e-100	356.00
IUUC-Oni-083009	Oryza nivara	48.66	3.00e-96	345.00
IUUC-Opu-083781	Oryza punctata	51.28	7.00e-99	353.00
IUUC-Oru-084517	Oryza rufipogon	48.66	3.00e-96	345.00
IUUC-Osa-085484	Oryza sativa	51.13	1.00e-99	355.00
IUUC-Pop-099647	Populus trichocarpa	42.37	2.00e-108	385.00
IUUC-Ppe-101833	Prunus persica	43.24	2.00e-114	405.00
IUUC-Smo-109063	Selaginella moellendorffii	38.40	6.00e-41	160.00
IUUC-Sit-109887	Setaria italica	51.00	2.00e-102	365.00
IUUC-Sly-111601	Solanum lycopersicum	38.45	7.00e-106	377.00
IUUC-Stu-112708	Solanum tuberosum	53.82	1.00e-109	389.00
IUUC-Sbi-114727	Sorghum bicolor	50.43	1.00e-101	362.00
IUUC-Tca-121644	Theobroma cacao	42.13	1.00e-103	369.00
IUUC-Tae-123256	Triticum aestivum	51.83	1.00e-104	372.00
IUUC-Vvi-131460	Vitis vinifera	43.93	9.00e-109	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence