iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132582

Ensembl Protein ID

ENSXETP00000005611.3

UniProt Accession

F6U5F0; F6U5F0_XENTR

Genbank Protein ID

ENSXETP00000005611

Protein Name

Dmx-like 1

Genbank Nucleotide ID

AAMC01003949

Gene Name

dmxl1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000017568.4	ENSXETT00000005611.3	ENSXETP00000005611.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-15	54.7	2925	2962

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H + v ++a  ++  ++++Gs  g+ikvW+l+t +l +
   Q: 2925 HDSAVKAIAIdTTeEYFITGSAEGNIKVWNLTTLNLMH 2962
           9999******9556******************988766 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

QNLHQNLSVS SRLTDYCFGL LHWENVTAYA SGCDIVILGS DFERLQVIPG VQHGNILVGC 60
VDCSMQQARI AASYGNVICI FEPVNLLQQK TSQSDSVRTQ WQKSGQIVLD SVVHNLTWDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAACCTCC ACCAAAACCT ATCAGTATCT TCTGGAAGTC GCCCGAAGTT TCCTCTCAAG 60
GCAACTTCGG GCGGCTTCTG GAAATCGTAG CGACGCGTAT GCCATCCCAC CGGCGATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001368	Ailuropoda melanoleuca	70.61	0.00e+00	4161.00
IUUC-Atr-002754	Amborella trichopoda	23.19	4.00e-18	86.30
IUUC-Apl-003377	Anas platyrhynchos	70.86	0.00e+00	4066.00
IUUC-Aca-004649	Anolis carolinensis	68.85	0.00e+00	3935.00
IUUC-Ame-010919	Astyanax mexicanus	62.86	0.00e+00	2909.00
IUUC-Bta-013088	Bos taurus	70.80	0.00e+00	4179.00
IUUC-Bdi-014471	Brachypodium distachyon	23.15	9.00e-19	88.60
IUUC-Cel-018537	Caenorhabditis elegans	30.50	0.00e+00	1268.00
IUUC-Cja-019137	Callithrix jacchus	70.62	0.00e+00	4143.00
IUUC-Cfa-021215	Canis familiaris	71.04	0.00e+00	4178.00
IUUC-Cpo-022333	Cavia porcellus	66.46	0.00e+00	3763.00
IUUC-Csa-023151	Chlorocebus sabaeus	70.56	0.00e+00	4163.00
IUUC-Cho-024613	Choloepus hoffmanni	66.06	0.00e+00	1449.00
IUUC-Csv-026055	Ciona savignyi	29.95	0.00e+00	787.00
IUUC-Dno-029601	Dasypus novemcinctus	67.75	0.00e+00	3881.00
IUUC-Dor-030381	Dipodomys ordii	69.55	0.00e+00	1159.00
IUUC-Dme-031825	Drosophila melanogaster	36.72	0.00e+00	1144.00
IUUC-Ete-032464	Echinops telfairi	62.97	0.00e+00	1912.00
IUUC-Eeu-035011	Erinaceus europaeus	65.43	0.00e+00	1946.00
IUUC-Fca-035735	Felis catus	71.36	0.00e+00	4180.00
IUUC-Fal-037367	Ficedula albicollis	70.46	0.00e+00	4058.00
IUUC-Gmo-038687	Gadus morhua	58.17	0.00e+00	2347.00
IUUC-Gac-041986	Gasterosteus aculeatus	58.39	0.00e+00	3239.00
IUUC-Ggo-044811	Gorilla gorilla	70.27	0.00e+00	4166.00
IUUC-Hsa-045950	Homo sapiens	70.65	0.00e+00	4187.00
IUUC-Hvu-047213	Hordeum vulgare	21.76	3.00e-16	78.60
IUUC-Lch-050020	Latimeria chalumnae	67.29	0.00e+00	3823.00
IUUC-Loc-052909	Lepisosteus oculatus	66.27	0.00e+00	3763.00
IUUC-Laf-054195	Loxodonta africana	71.54	0.00e+00	4166.00
IUUC-Mcc-055646	Macaca mulatta	70.56	0.00e+00	4163.00
IUUC-Meu-056627	Macropus eugenii	63.33	0.00e+00	1131.00
IUUC-Mmr-060784	Microcebus murinus	69.74	0.00e+00	4047.00
IUUC-Mdo-062914	Monodelphis domestica	70.71	0.00e+00	4160.00
IUUC-Mmu-063808	Mus musculus	69.05	0.00e+00	4017.00
IUUC-Mlu-067458	Myotis lucifugus	68.96	0.00e+00	4026.00
IUUC-Nle-070123	Nomascus leucogenys	69.75	0.00e+00	4141.00
IUUC-Ont-071658	Oreochromis niloticus	59.56	0.00e+00	3322.00
IUUC-Ocu-074048	Oryctolagus cuniculus	68.78	0.00e+00	4016.00
IUUC-Osa-085332	Oryza sativa	23.05	6.00e-20	92.40
IUUC-Ola-086945	Oryzias latipes	57.24	0.00e+00	3194.00
IUUC-Oga-088816	Otolemur garnettii	69.93	0.00e+00	4085.00
IUUC-Oar-089618	Ovis aries	70.89	0.00e+00	4185.00
IUUC-Ptr-090937	Pan troglodytes	70.43	0.00e+00	4169.00
IUUC-Pan-092151	Papio anubis	70.56	0.00e+00	4195.00
IUUC-Psi-093590	Pelodiscus sinensis	71.43	0.00e+00	4159.00
IUUC-Pfo-097445	Poecilia formosa	57.17	0.00e+00	3150.00
IUUC-Pab-098237	Pongo abelii	70.23	0.00e+00	4135.00
IUUC-Pca-101008	Procavia capensis	72.19	0.00e+00	1176.00
IUUC-Pva-102348	Pteropus vampyrus	65.66	0.00e+00	2514.00
IUUC-Rno-105076	Rattus norvegicus	69.94	0.00e+00	4025.00
IUUC-Sha-106860	Sarcophilus harrisii	70.92	0.00e+00	4177.00
IUUC-Smo-109444	Selaginella moellendorffii	23.23	1.00e-15	77.40
IUUC-Sit-109981	Setaria italica	21.34	3.00e-14	74.30
IUUC-Sar-113751	Sorex araneus	69.40	0.00e+00	1928.00
IUUC-Ssc-116371	Sus scrofa	70.29	0.00e+00	4147.00
IUUC-Tgu-117108	Taeniopygia guttata	69.72	0.00e+00	4047.00
IUUC-Tru-117628	Takifugu rubripes	57.90	0.00e+00	3226.00
IUUC-Tsy-118837	Tarsius syrichta	65.63	0.00e+00	2521.00
IUUC-Tni-120709	Tetraodon nigroviridis	58.10	0.00e+00	2652.00
IUUC-Tbe-127953	Tupaia belangeri	70.41	0.00e+00	2294.00
IUUC-Ttr-128991	Tursiops truncatus	68.86	0.00e+00	3465.00
IUUC-Vpa-130309	Vicugna pacos	68.75	0.00e+00	2325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence