iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110282

Ensembl Protein ID

Si017178m

UniProt Accession

K3YSD4; K3YSD4_SETIT

Genbank Protein ID

KQL29945.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

LOC101763825; SETIT_017178mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017178m.g	Si017178m	Si017178m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.9	148	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplv.lp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++ lp C H+fh dC+  w        ++ +CP+Cr
   Q: 148  CAVCLSEFeggDR-LRLlLPkCSHAFHPDCIGEW------LAGHVTCPVCR 191
           ********66533.4432557*************......**********8 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSSTPRHGGH RAALLAAVVL ASMLAAARAQ QAQGGDASSG SGGPDQVSTA MVALLAAVVA 60
VFVFIAASTV YLRHCSGYAV STRSTSGDGG RAAGAPSSLD AFFASRSRWQ RRRRSRGLDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGACAGCC GACTAGTCAG CTCAACCCGC GCAAGCAGGA TGTCCTCCAC GCCTCGCCAC 60
GGCGGCCACC GCGCGGCGCT GCTCGCCGCG GTCGTCCTCG CGTCCATGCT CGCGGCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sita:101763825

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014639	Brachypodium distachyon	49.24	5.00e-58	217.00
IUUC-Hvu-047096	Hordeum vulgare	53.97	7.00e-67	246.00
IUUC-Obr-076795	Oryza brachyantha	60.07	2.00e-62	232.00
IUUC-Ogl-077862	Oryza glaberrima	56.76	3.00e-69	254.00
IUUC-Ogu-078376	Oryza glumaepatula	56.18	2.00e-68	252.00
IUUC-Oin-079432	Oryza indica	57.44	2.00e-69	255.00
IUUC-Olo-080975	Oryza longistaminata	60.95	5.00e-61	227.00
IUUC-Ome-081871	Oryza meridionalis	58.94	5.00e-58	217.00
IUUC-Oni-082727	Oryza nivara	57.44	2.00e-69	255.00
IUUC-Oru-084529	Oryza rufipogon	57.35	2.00e-69	255.00
IUUC-Osa-086269	Oryza sativa	57.35	2.00e-69	255.00
IUUC-Olu-087781	Ostreococcus lucimarinus	47.06	7.00e-15	72.40
IUUC-Pgr-103335	Puccinia graminis	42.11	4.00e-12	63.50
IUUC-Sbi-114463	Sorghum bicolor	70.45	2.00e-93	335.00
IUUC-Tae-124596	Triticum aestivum	58.25	6.00e-71	260.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence