iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114133

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G238000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g029030	Sb09g029030.1	Sb09g029030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-27	95.8	906	943

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           H  + ++++f   d t+l+sGsdD+ +kvW++ + +++
   Q: 906  HRKRAWSVSFseVDpTMLASGSDDCCVKVWSINQRNCI 943
           7778899***99777***************98776665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEGTTAAEVG GAGGGAAGDV QIKGTKENGQ PAAVAAGPPP QPSGSEALEM PATPVTRDLD 60
WSEHFSFFTS LGGFGASSDG ARGLTSVGLS NSESRPDSVT QRGLDHDAEE RVEELTLKNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAG CAGGCGGAGC AGAGAGAGAG GGTCGGACGG CGAGAGAGAA AAAAGAGGGA 60
AACCTAGGCG GCTTTCCGTT TCGGGAAATT CCCGGGCGCC CCGTCCGCGC TGCTCCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_09g029030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	76.02	0.00e+00	1404.00
IUUC-Atr-002506	Amborella trichopoda	52.96	0.00e+00	754.00
IUUC-Aly-005520	Arabidopsis lyrata	47.08	0.00e+00	722.00
IUUC-Ath-007297	Arabidopsis thaliana	46.46	0.00e+00	698.00
IUUC-Bdi-014698	Brachypodium distachyon	70.53	0.00e+00	1580.00
IUUC-Bol-015237	Brassica oleracea	45.69	0.00e+00	716.00
IUUC-Bra-016642	Brassica rapa	44.24	0.00e+00	693.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.69	9.00e-35	139.00
IUUC-Cho-024883	Choloepus hoffmanni	33.23	1.00e-42	167.00
IUUC-Dor-031110	Dipodomys ordii	49.84	1.00e-88	319.00
IUUC-Ete-033016	Echinops telfairi	49.84	6.00e-88	317.00
IUUC-Gma-044276	Glycine max	53.33	0.00e+00	799.00
IUUC-Hvu-047750	Hordeum vulgare	75.99	0.00e+00	1393.00
IUUC-Lpe-051349	Leersia perrieri	74.00	0.00e+00	1634.00
IUUC-Mtr-058593	Medicago truncatula	52.90	0.00e+00	787.00
IUUC-Mac-064712	Musa acuminata	49.95	0.00e+00	928.00
IUUC-Oba-075097	Oryza barthii	69.54	0.00e+00	1451.00
IUUC-Obr-076441	Oryza brachyantha	75.27	0.00e+00	1647.00
IUUC-Ogl-077669	Oryza glaberrima	75.85	0.00e+00	1650.00
IUUC-Ogu-078009	Oryza glumaepatula	69.54	0.00e+00	1448.00
IUUC-Oin-079775	Oryza indica	75.76	0.00e+00	1643.00
IUUC-Olo-080230	Oryza longistaminata	68.39	0.00e+00	1417.00
IUUC-Ome-081669	Oryza meridionalis	69.18	0.00e+00	1440.00
IUUC-Oni-082065	Oryza nivara	69.36	0.00e+00	1442.00
IUUC-Opu-083153	Oryza punctata	68.91	0.00e+00	1467.00
IUUC-Oru-084928	Oryza rufipogon	69.09	0.00e+00	1434.00
IUUC-Osa-085875	Oryza sativa	75.49	0.00e+00	1636.00
IUUC-Ppa-096019	Physcomitrella patens	50.39	2.00e-180	625.00
IUUC-Pop-098964	Populus trichocarpa	50.06	0.00e+00	783.00
IUUC-Ppe-101771	Prunus persica	51.50	0.00e+00	784.00
IUUC-Sit-110269	Setaria italica	86.19	0.00e+00	1883.00
IUUC-Sly-111360	Solanum lycopersicum	50.06	0.00e+00	763.00
IUUC-Stu-112382	Solanum tuberosum	48.75	0.00e+00	738.00
IUUC-Sar-113230	Sorex araneus	41.88	2.00e-65	242.00
IUUC-Tca-121721	Theobroma cacao	48.58	0.00e+00	771.00
IUUC-Tae-123049	Triticum aestivum	76.10	0.00e+00	1423.00
IUUC-Tur-126357	Triticum urartu	73.46	0.00e+00	1358.00
IUUC-Tbe-127253	Tupaia belangeri	43.13	2.00e-69	256.00
IUUC-Vvi-131450	Vitis vinifera	54.60	0.00e+00	815.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence