iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114847

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G308100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g030040	Sb01g030040.1	Sb01g030040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-11	44.3	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f  +dg++v+p CgH++ha C+ +w         + +CP+Cr
   Q: 130  CPICLEPFgdDDGVRVVPaCGHLYHAPCIDRW------LDVRNSCPVCR 172
           ********99899*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATAARASRR LAPAGDAQSH APHPHATPAV GGPVSSGSGG GGGRAQFNLS SSAATAVVFV 60
SILLCFILLC TYCRCARQRA VAGARRRVMR DLVPGGVALF LRPTAAALPP VLPYAAAASS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACGG CAGCGCGCGC GAGTAGGCGC CTGGCCCCGG CCGGCGACGC GCAGTCGCAC 60
GCGCCGCACC CGCACGCCAC GCCGGCGGTC GGCGGCCCCG TGTCGTCCGG CTCCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g030040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000200	Aegilops tauschii	82.35	5.00e-23	98.20
IUUC-Bdi-014626	Brachypodium distachyon	56.21	1.00e-32	131.00
IUUC-Hvu-047347	Hordeum vulgare	56.47	4.00e-29	120.00
IUUC-Lpe-051006	Leersia perrieri	58.47	2.00e-34	137.00
IUUC-Oba-075970	Oryza barthii	65.71	1.00e-39	155.00
IUUC-Ogl-077143	Oryza glaberrima	65.71	7.00e-40	155.00
IUUC-Ogu-078550	Oryza glumaepatula	73.21	2.00e-21	93.60
IUUC-Oin-079509	Oryza indica	59.56	1.00e-40	158.00
IUUC-Ome-081329	Oryza meridionalis	63.22	3.00e-44	170.00
IUUC-Oni-082252	Oryza nivara	65.71	1.00e-39	155.00
IUUC-Opu-084052	Oryza punctata	71.63	3.00e-49	187.00
IUUC-Oru-084204	Oryza rufipogon	65.71	1.00e-39	155.00
IUUC-Osa-086075	Oryza sativa	65.71	4.00e-40	157.00
IUUC-Sit-109785	Setaria italica	72.81	7.00e-56	209.00
IUUC-Tae-123824	Triticum aestivum	56.67	3.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence