iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_5AL_TGACv1_375369_AA1220530	TRIAE_CS42_5AL_TGACv1_375369_AA1220530.1	TRIAE_CS42_5AL_TGACv1_375369_AA1220530.1
TRIAE_CS42_5AL_TGACv1_375369_AA1220530	TRIAE_CS42_5AL_TGACv1_375369_AA1220530.2	TRIAE_CS42_5AL_TGACv1_375369_AA1220530.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.50e-17	64.1	126	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt............elknsevalkYeDedGDlvt 56
           ++vkvs++g+++++++dl+ + +++dL  a+++   t            ++++s+v  +YeD+dGD++ 
   Q: 126  NFVKVSMDGAPYLRKVDLKMYNTYKDLSIALQKmfSTftatgnegkmveAVNGSDVVTTYEDKDGDWM- 193
           79*******************************76116688999999999999***************. PP
   S: 57   lksDedldkavsllaskksllrlliqk 83
           l++D++++++v       s++rl+i+k
   Q: 194  LVGDVPWEMFVA------SCKRLRIMK 214
           ************......********8 PP

Organism

Triticum aestivum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAGADVDVGT ELRLGLPGGG AEAAKAGKRG YEDTIDLKLT LPTGGMQEDS AGKPEPAADK 60
AKRPAEAAAA DPEKPPAPKA QAVGWPPVRS YRRNAMTVQS VKIKKEEETE KQQPAAAAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCAGTCGT TGAGCAGACA ATCCAAGCCG GGGAAACATG GAAACAAAAA TTATTGGCTC 60
CAACCTCCAA GTAGGCTCAC TCATGCTCTA ACTAACTGTT GTTCTAGTAA CCCCACAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014647	Brachypodium distachyon	83.26	1.00e-79	289.00
IUUC-Hvu-047332	Hordeum vulgare	98.71	2.00e-88	318.00
IUUC-Opu-083338	Oryza punctata	71.55	4.00e-65	241.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence