iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078557

Ensembl Protein ID

OGLUM04G16290.1

UniProt Accession

A0A0D9ZM88; A0A0D9ZM88_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G16290	OGLUM04G16290.1	OGLUM04G16290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-23	82.4	223	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+d v+++a   d +ll s s+D+t+k+W + + ++l+s
   Q: 223  HADAVSGVAAsADgRLLFSVSWDKTLKLWAVPSLRCLQS 261
           999*****9995559*********************996 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MRLLPRLCMA TGDNAAAAGE GDSSNSGSKQ QAAAVSSSSS TVSTSSSAAA AAVSEASSSM 60
SLPSLPSLSD VTGSTSASLA ASFAHVTTLC PLSTAAAAAS AAAVAAADYS VHGGGGLVVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGCTTC TCCCGCGGCT TTGCATGGCC ACCGGCGACA ACGCGGCAGC CGCCGGCGAG 60
GGAGACAGCA GCAATAGCGG CAGTAAGCAG CAGGCAGCGG CGGTGTCGTC CTCCTCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015036	Brachypodium distachyon	75.00	4.00e-94	337.00
IUUC-Bol-015247	Brassica oleracea	47.32	2.00e-71	262.00
IUUC-Bra-017464	Brassica rapa	47.00	5.00e-71	261.00
IUUC-Hvu-047047	Hordeum vulgare	80.00	9.00e-113	399.00
IUUC-Lpe-051055	Leersia perrieri	65.99	1.00e-92	332.00
IUUC-Mac-065257	Musa acuminata	50.89	9.00e-73	266.00
IUUC-Ogl-077746	Oryza glaberrima	98.94	1.00e-145	509.00
IUUC-Oin-079061	Oryza indica	99.50	2.00e-144	504.00
IUUC-Ome-081975	Oryza meridionalis	96.17	1.00e-137	482.00
IUUC-Oni-083112	Oryza nivara	99.36	4.00e-146	510.00
IUUC-Opu-083152	Oryza punctata	88.37	2.00e-139	488.00
IUUC-Oru-084254	Oryza rufipogon	99.15	2.00e-145	508.00
IUUC-Osa-086021	Oryza sativa	99.25	1.00e-143	502.00
IUUC-Smo-108947	Selaginella moellendorffii	40.77	6.00e-40	157.00
IUUC-Sly-111566	Solanum lycopersicum	42.69	2.00e-68	252.00
IUUC-Stu-112893	Solanum tuberosum	43.03	4.00e-67	248.00
IUUC-Sbi-114374	Sorghum bicolor	72.86	4.00e-107	380.00
IUUC-Tae-123809	Triticum aestivum	80.71	4.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence