iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114431

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G226700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g019860	Sb01g019860.1	Sb01g019860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-22	78.6	490	520

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvW 28
           gHt  v+c+++    + ++l+s+sdD t+++W
   Q: 490  GHTMIVNCVSWnparP-HMLASASDDRTVRIW 520
           79999*******8754.99************* PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDLPESSVPC ADEGPAPHRL GPVDREELVR AMTQSLYSLG YRRAAAALEV ESGVPLYPPE 60
HDRLLLEVMA GRWDASAETV RSVAGVGDAD RAVAEFLVWR GYYLELLGMH GDAGLRRARE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCTCC CAGAGAGCTC TGTCCCCTGC GCAGACGAGG GCCCGGCACC TCACCGTCTT 60
GGCCCCGTCG ACCGCGAGGA GCTGGTGCGC GCCATGACAC AGTCGCTCTA CTCGCTCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g019860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000995	Aegilops tauschii	70.83	0.00e+00	719.00
IUUC-Bdi-014476	Brachypodium distachyon	76.69	0.00e+00	818.00
IUUC-Hvu-047777	Hordeum vulgare	76.47	0.00e+00	728.00
IUUC-Lpe-050773	Leersia perrieri	77.59	0.00e+00	816.00
IUUC-Mac-065457	Musa acuminata	69.38	6.00e-125	439.00
IUUC-Oba-075135	Oryza barthii	78.86	0.00e+00	810.00
IUUC-Obr-076019	Oryza brachyantha	79.62	0.00e+00	828.00
IUUC-Ogl-077433	Oryza glaberrima	81.86	3.00e-107	379.00
IUUC-Ogu-078478	Oryza glumaepatula	78.67	0.00e+00	807.00
IUUC-Oin-079427	Oryza indica	78.48	0.00e+00	808.00
IUUC-Olo-080734	Oryza longistaminata	77.99	0.00e+00	717.00
IUUC-Ome-081855	Oryza meridionalis	78.46	0.00e+00	798.00
IUUC-Oni-082118	Oryza nivara	78.86	0.00e+00	810.00
IUUC-Opu-083225	Oryza punctata	78.39	0.00e+00	805.00
IUUC-Oru-084705	Oryza rufipogon	78.86	0.00e+00	810.00
IUUC-Ppe-101881	Prunus persica	49.02	9.00e-134	469.00
IUUC-Sit-110082	Setaria italica	90.27	0.00e+00	902.00
IUUC-Tae-125733	Triticum aestivum	78.07	0.00e+00	833.00
IUUC-Tur-126823	Triticum urartu	70.44	0.00e+00	723.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence