iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014662

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

BRADI_3g56517

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G56517	BRADI3G56517.1	BRADI3G56517.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-16	59.2	362	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           H ++vt+l+     + t+l+sGs Dgt+k+WD r+ v
   Q: 362  HDGDVTDLSIsqwmT-TRLASGSKDGTVKIWDDRKSV 397
           9999***96654344.99**************77655 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASPAGNPNP NPNNPNPPFE VSMLFRPPHN PAPTASPIFP GAAGPPPPSG PYSYPPATPP 60
FHRGPYLHYA QDPQPPMPRP AMSFPMANPN LNPSANPGVS PAPNPGARLM QLLGNSGGSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATGGCGTCT CCAGCCGGAA ACCCTAATCC GAACCCCAAC AACCCCAATC CCCCCTTCGA 60
GGTGTCCATG CTCTTCAGGC CGCCTCACAA CCCCGCGCCT ACCGCCTCGC CCATCTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

bdi:100830941

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000944	Aegilops tauschii	81.38	0.00e+00	2026.00
IUUC-Apl-003566	Anas platyrhynchos	28.37	1.00e-05	44.30
IUUC-Ath-006946	Arabidopsis thaliana	48.03	0.00e+00	1028.00
IUUC-Bol-015150	Brassica oleracea	48.31	0.00e+00	963.00
IUUC-Bra-017673	Brassica rapa	48.81	0.00e+00	971.00
IUUC-Gma-044374	Glycine max	50.20	0.00e+00	1039.00
IUUC-Hvu-047830	Hordeum vulgare	86.39	0.00e+00	2092.00
IUUC-Lpe-051585	Leersia perrieri	76.07	0.00e+00	1786.00
IUUC-Mac-064436	Musa acuminata	56.70	0.00e+00	1325.00
IUUC-Obr-076430	Oryza brachyantha	76.95	0.00e+00	1836.00
IUUC-Ogl-077350	Oryza glaberrima	75.49	0.00e+00	1907.00
IUUC-Oin-079418	Oryza indica	78.50	0.00e+00	1772.00
IUUC-Olo-080844	Oryza longistaminata	74.22	0.00e+00	1721.00
IUUC-Oni-082323	Oryza nivara	75.04	0.00e+00	1884.00
IUUC-Opu-084175	Oryza punctata	75.33	0.00e+00	1869.00
IUUC-Oru-084677	Oryza rufipogon	74.61	0.00e+00	1862.00
IUUC-Osa-085798	Oryza sativa	75.57	0.00e+00	1909.00
IUUC-Pop-100004	Populus trichocarpa	51.74	0.00e+00	1099.00
IUUC-Ppe-101310	Prunus persica	46.05	2.00e-143	503.00
IUUC-Sit-110590	Setaria italica	77.37	0.00e+00	1993.00
IUUC-Sbi-114653	Sorghum bicolor	75.97	0.00e+00	1908.00
IUUC-Tae-125495	Triticum aestivum	85.55	0.00e+00	2154.00
IUUC-Tur-126066	Triticum urartu	84.00	0.00e+00	1926.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence