iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095588

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545148

Gene Name

PHYPADRAFT_223462

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S259_87V6	PP1S259_87V6.1	PP1S259_87V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-43	145.6	148	183
UBD/Beta-Prp	1.40e-54	186.0	12	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+c++f     + +++vsG++D+++kvW+l+ +
   Q: 148  HTGWVSCVRFspvtaN-PIIVSGGWDKVVKVWNLTNC 183
           ***********98643.9***************9876 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           kgh ++ +t++++  ++ +l++++srd++i+vw +t++        r+l gh  +v++v +s+dg++ ++gs D+t+++wdl+tg++++ + gh+
   Q: 12   KGH-SNWVTAIACpLDNPDLILSSSRDKSIIVWTLTREEGnygvaRRRLTGHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGHT 105
           444.4466777777899999999999999999999997778898899999999999999999999999999999999999999999999999999 PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhp 147
           ++vls++fs ++  +vsGs+d+ti++w++  + c ++    + h+g+v+cv+++p
   Q: 106  KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLGE-CKYTiqDVDAHTGWVSCVRFSP 159
           99999999999999999999999999976544.4444224467999999999987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAETLVLRGT LKGHSNWVTA IACPLDNPDL ILSSSRDKSI IVWTLTREEG NYGVARRRLT 60
GHAHFVQDVV ISSDGQFALS GSWDGTLRLW DLNTGTTTRR FIGHTKDVLS VAFSVDNRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTTTAGAT TTGCTTCATG GTGAACTCCT TCCTCAGGCA GAGAACATAC AAAATTGCTG 60
GTTCCCCTGT TCCCATGCAC ATGCTGACCC GGTGGGGCTG AAACCCTAAG TTAGGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_223462

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	70.34	6.00e-116	409.00
IUUC-Aml-001935	Ailuropoda melanoleuca	75.08	7.00e-140	489.00
IUUC-Apl-003918	Anas platyrhynchos	76.90	2.00e-126	444.00
IUUC-Aca-004869	Anolis carolinensis	75.08	7.00e-140	489.00
IUUC-Ago-007720	Ashbya gossypii	53.94	6.00e-97	346.00
IUUC-Bta-013357	Bos taurus	75.08	7.00e-140	489.00
IUUC-Cja-019914	Callithrix jacchus	75.08	7.00e-140	489.00
IUUC-Cfa-020755	Canis familiaris	75.08	7.00e-140	489.00
IUUC-Cpo-022377	Cavia porcellus	75.08	6.00e-140	489.00
IUUC-Csa-023025	Chlorocebus sabaeus	75.08	8.00e-140	489.00
IUUC-Cin-025647	Ciona intestinalis	70.51	2.00e-128	451.00
IUUC-Csv-026027	Ciona savignyi	71.15	1.00e-128	452.00
IUUC-Dre-028669	Danio rerio	75.72	3.00e-140	490.00
IUUC-Dor-031098	Dipodomys ordii	66.45	1.00e-104	372.00
IUUC-Fca-036315	Felis catus	75.08	7.00e-140	489.00
IUUC-Gmo-039630	Gadus morhua	74.11	2.00e-136	477.00
IUUC-Gga-040540	Gallus gallus	75.08	7.00e-140	489.00
IUUC-Ggo-045253	Gorilla gorilla	75.08	7.00e-140	489.00
IUUC-Hsa-046809	Homo sapiens	75.08	7.00e-140	489.00
IUUC-Hvu-047683	Hordeum vulgare	69.33	3.00e-129	453.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	75.08	7.00e-140	489.00
IUUC-Loc-052163	Lepisosteus oculatus	76.04	2.00e-140	491.00
IUUC-Laf-054422	Loxodonta africana	75.08	7.00e-140	489.00
IUUC-Mga-059387	Meleagris gallopavo	75.08	7.00e-140	489.00
IUUC-Mmr-061141	Microcebus murinus	68.42	2.00e-102	364.00
IUUC-Mdo-062932	Monodelphis domestica	75.08	7.00e-140	489.00
IUUC-Mmu-064132	Mus musculus	75.08	7.00e-140	489.00
IUUC-Mpu-066721	Mustela putorius furo	74.12	3.00e-136	477.00
IUUC-Nle-069865	Nomascus leucogenys	75.08	8.00e-140	489.00
IUUC-Opr-071100	Ochotona princeps	62.94	5.00e-107	380.00
IUUC-Oan-072788	Ornithorhynchus anatinus	75.08	7.00e-140	489.00
IUUC-Ocu-073844	Oryctolagus cuniculus	73.16	2.00e-134	470.00
IUUC-Olu-087817	Ostreococcus lucimarinus	85.03	2.00e-161	560.00
IUUC-Oga-088811	Otolemur garnettii	75.08	7.00e-140	489.00
IUUC-Oar-089962	Ovis aries	75.08	7.00e-140	489.00
IUUC-Ptr-091340	Pan troglodytes	75.08	7.00e-140	489.00
IUUC-Pab-097863	Pongo abelii	75.08	7.00e-140	489.00
IUUC-Pva-102746	Pteropus vampyrus	60.70	3.00e-104	370.00
IUUC-Rno-104964	Rattus norvegicus	75.08	7.00e-140	489.00
IUUC-Sha-107409	Sarcophilus harrisii	75.08	7.00e-140	489.00
IUUC-Sit-110060	Setaria italica	71.91	4.00e-134	470.00
IUUC-Sar-113173	Sorex araneus	75.08	7.00e-140	489.00
IUUC-Ssc-116218	Sus scrofa	73.16	2.00e-136	477.00
IUUC-Tru-118202	Takifugu rubripes	75.08	9.00e-139	485.00
IUUC-Tni-120260	Tetraodon nigroviridis	73.80	3.00e-137	480.00
IUUC-Tca-120951	Theobroma cacao	74.07	6.00e-145	506.00
IUUC-Tae-123560	Triticum aestivum	69.33	4.00e-129	453.00
IUUC-Tur-126335	Triticum urartu	73.78	3.00e-115	407.00
IUUC-Ttr-128637	Tursiops truncatus	65.50	7.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence