iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d002084	Zm00001d002084_T002	Zm00001d002084_T002
Zm00001d002084	Zm00001d002084_T003	Zm00001d002084_T003
Zm00001d002084	Zm00001d002084_T005	Zm00001d002084_T005
Zm00001d002084	Zm00001d002084_T006	Zm00001d002084_T006
Zm00001d002084	Zm00001d002084_T004	Zm00001d002084_T004
Zm00001d002084	Zm00001d002084_T007	Zm00001d002084_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/ZnF_UBP	5.10e-27	95.9	329	389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/ZnF_UBP

   S: 2    kcsvcdktenlWlcLtcgsvgCGRyvegHalkHyeetqhplvlslstlsvycYacddyvhr 62
           +csvc++t nlW+c++cg+vgCGRy+egHa++H+++tqh+++l+l+t++v++Y++d++vhr
   Q: 329  TCSVCQTTGNLWICVICGFVGCGRYQEGHAKQHWKDTQHCYSLDLETQRVWDYVGDSFVHR 389
           6**********************************************************96 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MFVLRIQSVD FPDAAVAAVA ADEVGTSSGG VTTSRPLSSH PPPSTTTSSI LTLELPGANP 60
VAPSRSPRIL HTRGVIHLYH SSSSTSTSSS YASAVAATSS SSSGPATPQP ASDSHLPLCR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACCCAGCC ATCATGTTCG TCCTGCGAAT CCAGTCCGTC GACTTCCCCG ACGCCGCCGT 60
GGCAGCAGTC GCCGCCGACG AAGTCGGCAC CAGCAGCGGC GGCGTTACCA CCTCTCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR011422--BRAP2
IPR033273--BRIZ1
IPR012677--Nucleotide-bd_a/b_plait
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50271--ZF_UBP

Pfam

PF07576--BRAP2
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010029--P:regulation of seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000519	Aegilops tauschii	69.08	2.00e-101	362.00
IUUC-Bdi-015007	Brachypodium distachyon	78.99	1.00e-110	393.00
IUUC-Hvu-047475	Hordeum vulgare	76.52	7.00e-117	412.00
IUUC-Lpe-050777	Leersia perrieri	61.56	0.00e+00	649.00
IUUC-Mac-065159	Musa acuminata	47.80	2.00e-146	511.00
IUUC-Oba-075084	Oryza barthii	63.27	0.00e+00	659.00
IUUC-Obr-076449	Oryza brachyantha	62.98	0.00e+00	648.00
IUUC-Ogl-077482	Oryza glaberrima	63.36	0.00e+00	649.00
IUUC-Ogu-078968	Oryza glumaepatula	63.27	0.00e+00	660.00
IUUC-Oin-079888	Oryza indica	78.33	9.00e-124	436.00
IUUC-Olo-080753	Oryza longistaminata	64.73	1.00e-156	545.00
IUUC-Ome-081756	Oryza meridionalis	63.61	0.00e+00	661.00
IUUC-Oni-082434	Oryza nivara	63.27	0.00e+00	659.00
IUUC-Opu-083262	Oryza punctata	62.50	3.00e-180	624.00
IUUC-Oru-084381	Oryza rufipogon	63.27	0.00e+00	660.00
IUUC-Osa-085498	Oryza sativa	62.95	0.00e+00	648.00
IUUC-Pop-099070	Populus trichocarpa	44.07	4.00e-118	417.00
IUUC-Ppe-101827	Prunus persica	43.90	2.00e-122	432.00
IUUC-Sit-110709	Setaria italica	91.02	3.00e-129	454.00
IUUC-Tca-121400	Theobroma cacao	41.77	3.00e-121	427.00
IUUC-Tae-124840	Triticum aestivum	76.34	5.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence