iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037438

Ensembl Protein ID

ENSFALP00000000370.1

UniProt Accession

U3JC66; U3JC66_FICAL

Genbank Protein ID

ENSFALP00000000370

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AGTO01001990

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000000360.1	ENSFALT00000000373.1	ENSFALP00000000370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-18	63.7	228	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ v+ l+  ++   lvsGsdDg+++ W+++t ++l++
   Q: 228  GHSGLVRTLSVaPSgQWLVSGSDDGSVRFWEVSTARCLRT 267
           8********99966699********************985 PP

Organism

Ficedula albicollis

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

RTVQDRLTGA DVRLSEEQLQ LVQRLQRGQF GDVNFDPYEV TAIPHRNGGG IPPGNDPVPK 60
SPPIPNPGNS PQVSKLVHAI KMGWIQPRKP KENVPTFYDL WAREDPNSIL GRHKMHVPAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGACGGTGC AGGACAGACT GACGGGCGCC GACGTCCGTC TGTCCGAGGA GCAGCTGCAG 60
CTGGTGCAGC GCCTGCAGCG GGGGCAGTTC GGGGACGTCA ACTTCGACCC CTACGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.20	2.00e-109	389.00
IUUC-Aml-001507	Ailuropoda melanoleuca	65.13	0.00e+00	684.00
IUUC-Atr-003171	Amborella trichopoda	36.39	6.00e-54	205.00
IUUC-Apl-003545	Anas platyrhynchos	65.32	0.00e+00	648.00
IUUC-Aly-005649	Arabidopsis lyrata	42.76	9.00e-131	460.00
IUUC-Ath-007625	Arabidopsis thaliana	43.11	4.00e-129	455.00
IUUC-Ago-007958	Ashbya gossypii	41.21	6.00e-133	468.00
IUUC-Acl-008344	Aspergillus clavatus	42.55	7.00e-115	407.00
IUUC-Afl-008616	Aspergillus flavus	42.71	1.00e-118	420.00
IUUC-Afu-009083	Aspergillus fumigatus	43.03	9.00e-111	394.00
IUUC-Ani-009365	Aspergillus nidulans	42.04	1.00e-117	417.00
IUUC-Ang-009796	Aspergillus niger	41.88	1.00e-111	397.00
IUUC-Aor-010015	Aspergillus oryzae	42.71	1.00e-118	420.00
IUUC-Ate-010537	Aspergillus terreus	43.68	7.00e-121	427.00
IUUC-Ame-011767	Astyanax mexicanus	74.88	2.00e-98	351.00
IUUC-Bgr-012286	Blumeria graminis	43.74	3.00e-124	439.00
IUUC-Bta-013569	Bos taurus	69.38	0.00e+00	745.00
IUUC-Bci-013820	Botrytis cinerea	40.89	2.00e-114	406.00
IUUC-Bdi-014477	Brachypodium distachyon	45.47	7.00e-138	484.00
IUUC-Bol-016099	Brassica oleracea	43.59	7.00e-133	467.00
IUUC-Bra-017174	Brassica rapa	43.59	3.00e-133	469.00
IUUC-Cel-018201	Caenorhabditis elegans	42.00	3.00e-119	422.00
IUUC-Cja-019009	Callithrix jacchus	57.99	0.00e+00	642.00
IUUC-Cfa-020173	Canis familiaris	64.07	0.00e+00	693.00
IUUC-Cpo-021796	Cavia porcellus	69.38	0.00e+00	751.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	45.99	3.00e-130	458.00
IUUC-Csa-023440	Chlorocebus sabaeus	69.38	0.00e+00	761.00
IUUC-Cin-025782	Ciona intestinalis	49.42	6.00e-165	574.00
IUUC-Csv-026352	Ciona savignyi	52.62	8.00e-168	583.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.58	9.00e-94	337.00
IUUC-Cne-027004	Cryptococcus neoformans	44.14	3.00e-136	479.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.91	8.00e-99	354.00
IUUC-Dre-028658	Danio rerio	67.08	0.00e+00	766.00
IUUC-Dno-028883	Dasypus novemcinctus	68.85	0.00e+00	730.00
IUUC-Dor-031031	Dipodomys ordii	69.20	0.00e+00	760.00
IUUC-Dse-031443	Dothistroma septosporum	38.91	7.00e-110	391.00
IUUC-Dme-031786	Drosophila melanogaster	49.14	2.00e-163	569.00
IUUC-Eca-033677	Equus caballus	69.55	0.00e+00	753.00
IUUC-Eeu-035310	Erinaceus europaeus	65.26	7.00e-165	573.00
IUUC-Fca-035888	Felis catus	66.61	0.00e+00	722.00
IUUC-Fox-037973	Fusarium oxysporum	42.15	8.00e-131	460.00
IUUC-Fso-038187	Fusarium solani	42.37	1.00e-129	456.00
IUUC-Gmo-039114	Gadus morhua	61.84	0.00e+00	686.00
IUUC-Ggr-039746	Gaeumannomyces graminis	41.20	6.00e-127	447.00
IUUC-Gga-040631	Gallus gallus	68.73	2.00e-139	488.00
IUUC-Gac-042582	Gasterosteus aculeatus	62.50	0.00e+00	670.00
IUUC-Gma-044215	Glycine max	43.77	1.00e-125	443.00
IUUC-Ggo-045587	Gorilla gorilla	69.20	0.00e+00	758.00
IUUC-Hsa-046319	Homo sapiens	69.20	0.00e+00	759.00
IUUC-Hvu-047526	Hordeum vulgare	44.88	3.00e-135	475.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	68.50	0.00e+00	744.00
IUUC-Kpa-049221	Komagataella pastoris	41.11	9.00e-128	451.00
IUUC-Lch-049640	Latimeria chalumnae	64.72	0.00e+00	768.00
IUUC-Lpe-051135	Leersia perrieri	44.91	1.00e-63	237.00
IUUC-Loc-051930	Lepisosteus oculatus	65.03	0.00e+00	770.00
IUUC-Lma-053290	Leptosphaeria maculans	42.18	3.00e-116	412.00
IUUC-Laf-053903	Loxodonta africana	61.81	0.00e+00	652.00
IUUC-Mcc-055471	Macaca mulatta	68.85	0.00e+00	758.00
IUUC-Meu-056190	Macropus eugenii	68.14	0.00e+00	742.00
IUUC-Mor-057135	Magnaporthe oryzae	42.12	8.00e-122	431.00
IUUC-Mpo-057475	Magnaporthe poae	40.65	1.00e-116	413.00
IUUC-Mtr-058689	Medicago truncatula	39.34	8.00e-113	401.00
IUUC-Mla-059149	Melampsora laricipopulina	42.63	3.00e-133	469.00
IUUC-Mga-059645	Meleagris gallopavo	58.20	3.00e-83	300.00
IUUC-Mvi-060485	Microbotryum violaceum	44.67	7.00e-120	425.00
IUUC-Mmr-061674	Microcebus murinus	67.43	0.00e+00	723.00
IUUC-Mdo-062973	Monodelphis domestica	66.55	0.00e+00	750.00
IUUC-Mmu-064180	Mus musculus	67.43	0.00e+00	743.00
IUUC-Mac-064535	Musa acuminata	39.14	9.00e-70	258.00
IUUC-Mpu-066406	Mustela putorius furo	69.03	0.00e+00	762.00
IUUC-Mlu-067795	Myotis lucifugus	70.44	0.00e+00	725.00
IUUC-Nfi-068516	Neosartorya fischeri	43.38	6.00e-105	374.00
IUUC-Ncr-068767	Neurospora crassa	41.67	7.00e-109	387.00
IUUC-Opr-071084	Ochotona princeps	73.52	7.00e-111	393.00
IUUC-Ont-071614	Oreochromis niloticus	62.85	0.00e+00	726.00
IUUC-Oba-075980	Oryza barthii	44.91	1.00e-63	237.00
IUUC-Obr-076799	Oryza brachyantha	45.92	4.00e-133	468.00
IUUC-Ogl-077134	Oryza glaberrima	45.29	1.00e-128	453.00
IUUC-Ogu-078655	Oryza glumaepatula	42.98	1.00e-121	430.00
IUUC-Oin-079654	Oryza indica	45.29	1.00e-128	453.00
IUUC-Olo-080706	Oryza longistaminata	45.26	2.00e-64	239.00
IUUC-Ome-081716	Oryza meridionalis	45.26	4.00e-64	239.00
IUUC-Oni-082508	Oryza nivara	42.40	5.00e-117	414.00
IUUC-Opu-083707	Oryza punctata	45.26	2.00e-64	239.00
IUUC-Oru-084453	Oryza rufipogon	45.26	2.00e-64	239.00
IUUC-Osa-085811	Oryza sativa	45.29	2.00e-128	452.00
IUUC-Ola-087361	Oryzias latipes	62.37	0.00e+00	711.00
IUUC-Oga-088015	Otolemur garnettii	67.43	0.00e+00	759.00
IUUC-Oar-090058	Ovis aries	77.25	1.00e-74	273.00
IUUC-Ptr-090631	Pan troglodytes	58.59	3.00e-76	278.00
IUUC-Pan-092306	Papio anubis	69.26	0.00e+00	758.00
IUUC-Pma-094622	Petromyzon marinus	60.46	0.00e+00	713.00
IUUC-Pno-094794	Phaeosphaeria nodorum	37.35	2.00e-103	370.00
IUUC-Ppa-095528	Physcomitrella patens	40.70	5.00e-70	258.00
IUUC-Pfo-096682	Poecilia formosa	63.94	0.00e+00	739.00
IUUC-Pab-097939	Pongo abelii	68.44	0.00e+00	751.00
IUUC-Pop-099530	Populus trichocarpa	44.75	2.00e-132	466.00
IUUC-Pca-100333	Procavia capensis	67.73	0.00e+00	743.00
IUUC-Ppe-102078	Prunus persica	42.83	4.00e-124	438.00
IUUC-Pgr-103525	Puccinia graminis	43.58	5.00e-124	438.00
IUUC-Ptt-103929	Puccinia triticina	43.09	7.00e-119	421.00
IUUC-Pte-104029	Pyrenophora teres	42.44	1.00e-126	447.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.44	3.00e-126	445.00
IUUC-Rno-105248	Rattus norvegicus	67.96	0.00e+00	749.00
IUUC-Sce-106381	Saccharomyces cerevisiae	42.99	3.00e-65	243.00
IUUC-Sha-106519	Sarcophilus harrisii	68.14	0.00e+00	756.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	43.03	8.00e-126	444.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.99	3.00e-124	439.00
IUUC-Smo-109604	Selaginella moellendorffii	45.69	5.00e-130	458.00
IUUC-Sit-110551	Setaria italica	44.40	3.00e-130	459.00
IUUC-Sly-110970	Solanum lycopersicum	45.59	2.00e-58	219.00
IUUC-Stu-112593	Solanum tuberosum	44.44	2.00e-126	446.00
IUUC-Sar-113123	Sorex araneus	62.10	1.00e-102	365.00
IUUC-Sbi-113945	Sorghum bicolor	43.87	3.00e-132	465.00
IUUC-Sre-115188	Sporisorium reilianum	39.71	6.00e-121	428.00
IUUC-Ssc-115352	Sus scrofa	69.50	0.00e+00	762.00
IUUC-Tru-117685	Takifugu rubripes	63.67	0.00e+00	735.00
IUUC-Tni-119982	Tetraodon nigroviridis	61.68	0.00e+00	708.00
IUUC-Tca-121664	Theobroma cacao	44.35	1.00e-129	457.00
IUUC-Tre-122229	Trichoderma reesei	52.86	3.00e-65	243.00
IUUC-Tvi-122576	Trichoderma virens	43.63	3.00e-120	425.00
IUUC-Tae-125703	Triticum aestivum	44.90	1.00e-129	457.00
IUUC-Tur-126781	Triticum urartu	41.95	7.00e-106	378.00
IUUC-Tme-127080	Tuber melanosporum	47.03	4.00e-147	514.00
IUUC-Ttr-128514	Tursiops truncatus	63.54	3.00e-132	465.00
IUUC-Uma-129556	Ustilago maydis	54.03	2.00e-61	230.00
IUUC-Vda-129715	Verticillium dahliae	41.57	3.00e-121	429.00
IUUC-Vvi-131211	Vitis vinifera	43.49	1.00e-117	417.00
IUUC-Xma-133883	Xiphophorus maculatus	63.59	0.00e+00	713.00
IUUC-Yli-134438	Yarrowia lipolytica	52.63	4.00e-64	239.00
IUUC-Zma-135341	Zea mays	39.26	4.00e-65	242.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence