iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029740	Zm00001d029740_T002	Zm00001d029740_T002
Zm00001d029740	Zm00001d029740_T001	Zm00001d029740_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.60e-43	148.0	9	150

Active Site

Position(s)	Description	Evidence
94	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdppegisakpvdesd....ltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsil 86
           Rl++e k+++k++p+g++a+p++ +d    l+ w+++i G+++t +e g++ l+++f+edYP+kPPk+kf + +fhPnvy++G+vClsil
   Q: 9    RLAEERKAWRKNHPHGFVARPETLADgsanLMVWSCTIPGKQGTDWESGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL 98
           89******************9876555555************************************************************ PP
   S: 87   keeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +e++ W+pa++v+++l++iq ll++pnp++p++++ ++l+ ++++eyk++vr
   Q: 99   NEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
           *************************************************997 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSGGIARGRL AEERKAWRKN HPHGFVARPE TLADGSANLM VWSCTIPGKQ GTDWESGYYP 60
LTLHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE DSGWRPAITV KQILVGIQDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGGCGGTT TGTCATTAGA CTCACTTCCC CCAAACCCAA GGTGCGAGAG CTGCGACCGC 60
CGCAGCCGCC ATGTCGGGAG GAATCGCGCG CGGCCGCCTC GCCGAGGAGC GCAAGGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

zma:103637558

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cne-027034	Cryptococcus neoformans	58.28	4.00e-53	199.00
IUUC-Hvu-047363	Hordeum vulgare	94.94	1.00e-90	324.00
IUUC-Ome-081909	Oryza meridionalis	90.62	2.00e-87	313.00
IUUC-Ppa-095314	Physcomitrella patens	88.54	3.00e-83	299.00
IUUC-Sit-110037	Setaria italica	97.50	5.00e-93	332.00
IUUC-Sbi-114521	Sorghum bicolor	98.75	2.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence