iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104720

Ensembl Protein ID

EDU48366

UniProt Accession

B2W6K8; B2W6K8_PYRTR

Genbank Protein ID

EDU48366.1

Protein Name

LIM domain containing protein

Genbank Nucleotide ID

DS231619

Gene Name

PTRG_05446

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_05446	EDU48366	EDU48366

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	27.40	4.60e-02	36.20	IUUC-Ath-006630

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MHDLDTQEFM SLPNTMFPSR GSSRSGSESD MPRGLAPSHA LRPAPLGASG LSDVPLNALH 60
TPSDSGFSDD SYGSGFRSIA SSRSSPPESE AAHSRQVSKV SRSDFVDEEP MEPVPRSASP 120

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Nucleotide Sequence
(Fasta)

ATGCATGATC TGGATACCCA AGAATTCATG TCTCTCCCAA ACACCATGTT CCCTTCACGT 60
GGGTCAAGCC GTAGTGGCTC AGAGAGCGAT ATGCCAAGAG GTCTTGCACC ATCTCACGCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2

Pfam

PF00412--LIM

SMART

SM00132--LIM

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000663	Aegilops tauschii	25.29	7.00e-05	40.40
IUUC-Aml-001484	Ailuropoda melanoleuca	32.81	6.00e-06	43.10
IUUC-Atr-002465	Amborella trichopoda	21.88	1.00e-04	39.70
IUUC-Aca-004512	Anolis carolinensis	37.74	9.00e-07	45.80
IUUC-Aly-005589	Arabidopsis lyrata	29.58	4.00e-03	34.70
IUUC-Ath-006630	Arabidopsis thaliana	27.40	2.00e-03	35.80
IUUC-Ame-011762	Astyanax mexicanus	22.79	3.00e-06	45.80
IUUC-Bta-012510	Bos taurus	39.34	4.00e-07	47.00
IUUC-Bdi-014789	Brachypodium distachyon	27.08	1.00e-03	36.60
IUUC-Bol-015361	Brassica oleracea	29.58	5.00e-03	34.30
IUUC-Bra-016788	Brassica rapa	25.68	7.30e-02	30.00
IUUC-Cja-019248	Callithrix jacchus	35.19	9.00e-06	42.70
IUUC-Cfa-020352	Canis familiaris	32.79	8.00e-05	39.70
IUUC-Cpo-021667	Cavia porcellus	27.73	2.00e-12	66.20
IUUC-Csa-024190	Chlorocebus sabaeus	33.33	8.00e-06	42.70
IUUC-Dre-027455	Danio rerio	24.17	7.00e-06	44.30
IUUC-Dse-031181	Dothistroma septosporum	58.82	2.00e-50	192.00
IUUC-Dme-031605	Drosophila melanogaster	25.60	6.00e-09	55.50
IUUC-Eca-034183	Equus caballus	37.10	2.00e-06	45.10
IUUC-Fca-035680	Felis catus	36.07	6.00e-06	43.10
IUUC-Fal-037626	Ficedula albicollis	27.27	3.00e-12	65.50
IUUC-Gmo-038558	Gadus morhua	33.33	3.00e-04	37.70
IUUC-Gga-040724	Gallus gallus	23.62	2.00e-05	42.70
IUUC-Gac-041738	Gasterosteus aculeatus	35.19	1.00e-04	38.90
IUUC-Gma-042981	Glycine max	38.00	8.00e-03	33.50
IUUC-Ggo-044609	Gorilla gorilla	33.33	8.00e-06	42.70
IUUC-Hsa-045868	Homo sapiens	35.19	7.00e-06	43.90
IUUC-Hvu-047551	Hordeum vulgare	26.82	2.00e-06	45.10
IUUC-Itr-048876	Ictidomys tridecemlineatus	35.00	3.00e-06	43.90
IUUC-Lpe-050858	Leersia perrieri	28.26	1.00e-02	33.10
IUUC-Loc-052468	Lepisosteus oculatus	22.79	3.00e-06	45.40
IUUC-Laf-053824	Loxodonta africana	35.19	8.00e-06	42.70
IUUC-Mcc-054962	Macaca mulatta	33.33	8.00e-06	42.70
IUUC-Meu-056007	Macropus eugenii	33.90	7.00e-06	43.50
IUUC-Mtr-058103	Medicago truncatula	29.58	6.00e-03	33.90
IUUC-Mla-059141	Melampsora laricipopulina	33.90	9.00e-08	50.40
IUUC-Mmr-060595	Microcebus murinus	28.57	3.00e-13	68.90
IUUC-Mdo-062935	Monodelphis domestica	36.36	9.00e-07	45.80
IUUC-Mmu-063244	Mus musculus	35.19	1.00e-05	42.40
IUUC-Mpu-065888	Mustela putorius furo	31.67	4.00e-05	40.40
IUUC-Mlu-067124	Myotis lucifugus	32.26	4.00e-06	43.90
IUUC-Ncr-068674	Neurospora crassa	60.17	6.00e-47	181.00
IUUC-Opr-071221	Ochotona princeps	29.63	3.00e-04	38.10
IUUC-Ont-072000	Oreochromis niloticus	35.19	1.00e-05	42.00
IUUC-Oan-073012	Ornithorhynchus anatinus	32.73	9.00e-06	42.70
IUUC-Ocu-074376	Oryctolagus cuniculus	33.33	8.00e-05	39.70
IUUC-Oba-075638	Oryza barthii	30.49	5.00e-04	37.40
IUUC-Obr-076584	Oryza brachyantha	32.00	2.00e-04	38.50
IUUC-Ogl-077035	Oryza glaberrima	32.00	3.00e-04	38.10
IUUC-Ogu-078868	Oryza glumaepatula	27.17	2.00e-02	32.00
IUUC-Oin-079541	Oryza indica	32.00	2.00e-04	38.90
IUUC-Olo-080337	Oryza longistaminata	28.26	1.70e-02	33.10
IUUC-Oni-082197	Oryza nivara	27.17	2.00e-02	32.00
IUUC-Opu-083412	Oryza punctata	29.33	6.00e-04	37.40
IUUC-Oru-085246	Oryza rufipogon	27.17	2.00e-02	32.00
IUUC-Osa-085464	Oryza sativa	32.00	3.00e-04	38.10
IUUC-Ola-087406	Oryzias latipes	31.73	2.00e-10	59.30
IUUC-Olu-087728	Ostreococcus lucimarinus	27.43	7.90e-01	26.60
IUUC-Oga-088393	Otolemur garnettii	33.33	7.00e-06	43.10
IUUC-Oar-089421	Ovis aries	37.70	2.00e-06	45.10
IUUC-Pan-092163	Papio anubis	33.33	9.00e-06	42.70
IUUC-Psi-093043	Pelodiscus sinensis	42.42	2.00e-03	34.70
IUUC-Pno-094933	Phaeosphaeria nodorum	52.28	2.00e-90	325.00
IUUC-Ppa-096027	Physcomitrella patens	26.05	2.00e-05	42.70
IUUC-Pfo-097294	Poecilia formosa	27.50	5.00e-12	64.30
IUUC-Pab-098372	Pongo abelii	24.44	8.00e-07	47.80
IUUC-Pop-098996	Populus trichocarpa	29.09	5.00e-05	40.80
IUUC-Pca-100131	Procavia capensis	35.19	6.00e-06	44.30
IUUC-Ptt-104003	Puccinia triticina	36.44	3.00e-17	81.60
IUUC-Pte-104256	Pyrenophora teres	95.41	0.00e+00	631.00
IUUC-Rno-104992	Rattus norvegicus	35.19	8.00e-06	42.70
IUUC-Smo-108841	Selaginella moellendorffii	25.00	9.00e-03	32.70
IUUC-Sit-110147	Setaria italica	26.05	7.00e-03	33.90
IUUC-Sly-111689	Solanum lycopersicum	31.65	7.00e-04	37.00
IUUC-Stu-112186	Solanum tuberosum	31.65	7.00e-04	37.00
IUUC-Sar-113038	Sorex araneus	26.92	3.00e-06	45.40
IUUC-Sbi-114752	Sorghum bicolor	22.58	5.00e-04	37.40
IUUC-Sre-115199	Sporisorium reilianum	33.64	7.00e-10	58.20
IUUC-Ssc-116398	Sus scrofa	24.44	8.00e-07	47.80
IUUC-Tgu-116824	Taeniopygia guttata	27.27	7.00e-12	63.50
IUUC-Tca-121863	Theobroma cacao	39.58	1.30e-02	32.70
IUUC-Tae-125777	Triticum aestivum	25.99	3.00e-06	44.70
IUUC-Tur-126326	Triticum urartu	28.28	9.00e-05	39.70
IUUC-Tbe-127395	Tupaia belangeri	27.74	1.00e-08	52.80
IUUC-Ttr-128236	Tursiops truncatus	33.87	2.00e-06	45.40
IUUC-Uma-129653	Ustilago maydis	31.79	9.00e-11	60.80
IUUC-Vpa-130784	Vicugna pacos	28.47	9.00e-10	57.00
IUUC-Vvi-131569	Vitis vinifera	33.33	2.80e-02	31.60
IUUC-Xma-134125	Xiphophorus maculatus	27.27	7.00e-12	64.30
IUUC-Zma-135630	Zea mays	26.05	7.00e-03	33.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence