iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058325

Ensembl Protein ID

KEH24663

UniProt Accession

A0A072U680; A0A072U680_MEDTR

Genbank Protein ID

KEH24663.1

Protein Name

Anaphase-promoting complex subunit 11 RING-H2 finger protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g117540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g117540	KEH24663	KEH24663

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.9	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++    ++ ++vlp C+H+fh dC+ +w         + +CPlCr
   Q: 101  CSVCLSEVvegEK-VRVLPkCNHMFHIDCIDMW------FHSHSTCPLCR 143
           9*****9977455.*******************......9999******8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSDSLASDNN QLHDSPAVDI TGKIMVVIII LLFMVIVTFL FFHLFAKGFW WTQSRRSSDN 60
NSQSRRRRRS GQEGGGLDPS VLNSLPISIF NSKEDGFDLE CSVCLSEVVE GEKVRVLPKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATATGAAT TGGTACCTTT TGTGGTGGGG GGATTGATTA CTACAGATAC AGAGGCTGCT 60
GCTAATGGTT TGACTTTGGG TTTGAAATGA AAGTATTAAA AGAAAGATCC CGGAAACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_7g117540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014880	Brachypodium distachyon	46.49	1.00e-27	116.00
IUUC-Hvu-047652	Hordeum vulgare	44.72	3.00e-27	115.00
IUUC-Ome-081596	Oryza meridionalis	55.00	3.00e-21	94.70
IUUC-Oni-082758	Oryza nivara	52.22	3.00e-23	102.00
IUUC-Opu-083253	Oryza punctata	42.34	6.00e-16	77.40
IUUC-Olu-087845	Ostreococcus lucimarinus	51.02	2.00e-14	69.30
IUUC-Tae-125140	Triticum aestivum	45.53	3.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence