iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Sly-111686

Ensembl Protein ID

UniProt Accession

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g078390.1	Solyc04g078390.1.1	Solyc04g078390.1.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	49.22	7.00e-23	103.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKRQFDAGET DWANFTGGDH VKKMKKEMLE LEEERKLPMK RQFEANCAAK VSGDLKKMKQ 60
VIESPDADAD ADTEAVLLNE NLLYEVLKHV DGRTLATAAC VSKQWNQTAL DERLWELICT 120

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Nucleotide Sequence
(Fasta)

ATGAAGCGGC AATTCGACGC CGGAGAAACC GATTGGGCCA ATTTCACCGG CGGCGATCAT 60
GTGAAGAAGA TGAAGAAGGA GATGTTAGAG TTGGAGGAAG AGAGGAAGTT ACCGATGAAG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

KEGG

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	59.15	9.00e-30	122.00
IUUC-Aly-006435	Arabidopsis lyrata	55.80	5.00e-35	139.00
IUUC-Ath-007482	Arabidopsis thaliana	55.80	3.00e-35	140.00
IUUC-Bdi-014906	Brachypodium distachyon	36.99	4.00e-20	90.50
IUUC-Bol-016273	Brassica oleracea	50.28	4.00e-32	129.00
IUUC-Bra-016627	Brassica rapa	50.28	5.00e-32	129.00
IUUC-Gma-043301	Glycine max	58.87	9.00e-35	138.00
IUUC-Hvu-047070	Hordeum vulgare	54.05	3.00e-18	84.30
IUUC-Mtr-057791	Medicago truncatula	55.15	2.00e-34	137.00
IUUC-Mac-064781	Musa acuminata	51.82	1.00e-26	111.00
IUUC-Obr-076578	Oryza brachyantha	39.46	9.00e-23	99.80
IUUC-Ogl-077389	Oryza glaberrima	56.76	1.00e-13	68.90
IUUC-Oin-079212	Oryza indica	56.76	1.00e-13	68.90
IUUC-Pop-098990	Populus trichocarpa	62.32	2.00e-37	147.00
IUUC-Ppe-102068	Prunus persica	61.43	2.00e-33	134.00
IUUC-Smo-108701	Selaginella moellendorffii	42.75	1.00e-17	81.60
IUUC-Sit-110635	Setaria italica	56.76	2.00e-19	87.80
IUUC-Stu-111934	Solanum tuberosum	82.41	4.00e-70	256.00
IUUC-Sbi-113872	Sorghum bicolor	52.70	3.00e-13	68.20
IUUC-Tca-121336	Theobroma cacao	53.89	1.00e-37	147.00
IUUC-Vvi-131285	Vitis vinifera	54.59	5.00e-36	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence