iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017147

Ensembl Protein ID

Bra036534.1-P

UniProt Accession

M4F625; M4F625_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra036534	Bra036534.1	Bra036534.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-42	142.2	499	537
UBD/Beta-Prp	1.50e-67	228.9	350	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++ ++ +++++Gs D+t+++WD+ tg +++
   Q: 499  GHLSDVDCVQWhPNcNYIATGSSDKTVRLWDVQTGECVR 537
           8***********888*********************986 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl........................lrslsgheaevtavkfspdgkilvtgseDrtikv 78
           +h+   ++c  +s d+sl+a g+ d++ikvwd+ +                              l gh+++v++ +fsp g++ +++s D ti++
   Q: 350  THNG--LNCASISHDGSLVAGGFSDSSIKVWDMAKIGQagsgalqgesdtndqnvgpngrrnYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRL 443
           3444..67788899*******************997778********************9977777****************************** PP
   S: 79   wdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           w+ + +  ++ +kgh++ v++++fsp g++++s shdrt+r+w ++  q l+ + +gh + v cv++hp++n++++Gs D+tvrlWd++tg+++r 
   Q: 444  WSTQLNANLVCYKGHNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRVQPLR-IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRI 538
           ****************************************************.******************************************* PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn...... 264
           + g h ++v sl+++++g++++sg++dgt+ +wdl+t +c+  l gh++ v+s+  s ++ +l+sgs+D ++++Wd++s++ l++ + +n      
   Q: 539  FIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNgntnrl 633
           **9.**********************************************************************************9999999999 PP
   S: 265  .......ssvisvavlsfgdnvlv 281
                  +++++v +l+f++++l+
   Q: 634  rslrtfpTKSTPVHALRFSRRNLL 657
           999999999999999999987765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDPEQVDEFV MGYLKKKGFN NAAKQLQEAL HHNNGGTFNS TDYHNDPELT KLIRSFSQSE 60
NDPTRYRDGY SKLRSWAYNS LDLYKHELLR VMYPVFIHCY MDLVGKGHTQ EARAFFNSFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCAG AGCAAGTGGA CGAGTTCGTA ATGGGCTACT TGAAGAAGAA GGGCTTCAAC 60
AACGCAGCTA AACAGCTTCA AGAAGCTCTT CACCACAACA ATGGTGGCAC CTTCAATTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	64.39	1.00e-179	622.00
IUUC-Atr-003136	Amborella trichopoda	70.68	0.00e+00	932.00
IUUC-Aca-004522	Anolis carolinensis	37.02	3.00e-118	419.00
IUUC-Aly-006476	Arabidopsis lyrata	92.23	0.00e+00	1231.00
IUUC-Ath-006587	Arabidopsis thaliana	92.54	0.00e+00	1238.00
IUUC-Ago-007736	Ashbya gossypii	33.52	7.00e-107	381.00
IUUC-Afl-008659	Aspergillus flavus	30.36	5.00e-91	328.00
IUUC-Aor-010083	Aspergillus oryzae	30.36	5.00e-91	328.00
IUUC-Ame-010721	Astyanax mexicanus	45.61	4.00e-94	338.00
IUUC-Bgr-012257	Blumeria graminis	30.51	9.00e-86	311.00
IUUC-Bci-013737	Botrytis cinerea	29.12	7.00e-83	301.00
IUUC-Bdi-015041	Brachypodium distachyon	67.58	0.00e+00	806.00
IUUC-Bol-015483	Brassica oleracea	98.95	0.00e+00	1322.00
IUUC-Cpo-021454	Cavia porcellus	37.11	6.00e-120	424.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	39.00	7.00e-63	234.00
IUUC-Cho-024284	Choloepus hoffmanni	46.49	3.00e-78	286.00
IUUC-Cin-025457	Ciona intestinalis	51.92	4.00e-75	273.00
IUUC-Csv-025882	Ciona savignyi	43.41	5.00e-79	288.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.06	7.00e-75	275.00
IUUC-Cne-026876	Cryptococcus neoformans	31.64	8.00e-80	291.00
IUUC-Cme-027302	Cyanidioschyzon merolae	36.88	8.00e-115	407.00
IUUC-Dre-027980	Danio rerio	47.41	1.00e-94	340.00
IUUC-Dse-031547	Dothistroma septosporum	31.32	3.00e-89	322.00
IUUC-Dme-031917	Drosophila melanogaster	44.00	8.00e-83	301.00
IUUC-Ete-032712	Echinops telfairi	41.26	2.00e-72	266.00
IUUC-Eca-033927	Equus caballus	37.25	4.00e-119	421.00
IUUC-Fox-038049	Fusarium oxysporum	26.44	3.00e-64	239.00
IUUC-Fso-038302	Fusarium solani	28.37	1.00e-70	261.00
IUUC-Gmo-038832	Gadus morhua	44.76	2.00e-91	330.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.90	2.00e-73	270.00
IUUC-Gga-041147	Gallus gallus	36.97	4.00e-118	418.00
IUUC-Gac-041373	Gasterosteus aculeatus	43.49	1.00e-91	330.00
IUUC-Gma-043230	Glycine max	72.22	0.00e+00	973.00
IUUC-Ggo-044568	Gorilla gorilla	40.31	2.00e-73	270.00
IUUC-Hvu-047695	Hordeum vulgare	68.30	9.00e-180	622.00
IUUC-Lch-049526	Latimeria chalumnae	44.16	1.00e-84	307.00
IUUC-Lpe-051560	Leersia perrieri	63.99	0.00e+00	813.00
IUUC-Loc-052882	Lepisosteus oculatus	45.89	4.00e-92	332.00
IUUC-Meu-056182	Macropus eugenii	41.55	2.00e-71	263.00
IUUC-Mor-057024	Magnaporthe oryzae	28.40	2.00e-70	259.00
IUUC-Mpo-057520	Magnaporthe poae	30.12	1.00e-72	267.00
IUUC-Mtr-058754	Medicago truncatula	72.73	0.00e+00	1016.00
IUUC-Mla-058881	Melampsora laricipopulina	41.42	8.00e-77	281.00
IUUC-Mga-059776	Meleagris gallopavo	36.97	4.00e-118	418.00
IUUC-Ncr-068891	Neurospora crassa	29.65	4.00e-73	269.00
IUUC-Opr-070243	Ochotona princeps	41.14	1.00e-75	276.00
IUUC-Ont-071455	Oreochromis niloticus	45.63	1.00e-94	340.00
IUUC-Oan-073181	Ornithorhynchus anatinus	44.74	4.00e-95	341.00
IUUC-Ocu-073758	Oryctolagus cuniculus	37.62	5.00e-119	421.00
IUUC-Oba-075739	Oryza barthii	62.35	0.00e+00	748.00
IUUC-Obr-076111	Oryza brachyantha	68.41	0.00e+00	887.00
IUUC-Ogl-077914	Oryza glaberrima	65.48	0.00e+00	825.00
IUUC-Ogu-078057	Oryza glumaepatula	58.90	0.00e+00	694.00
IUUC-Oin-079473	Oryza indica	66.67	0.00e+00	836.00
IUUC-Olo-080557	Oryza longistaminata	57.19	0.00e+00	662.00
IUUC-Ome-081831	Oryza meridionalis	58.99	0.00e+00	694.00
IUUC-Oni-082441	Oryza nivara	59.97	0.00e+00	705.00
IUUC-Opu-083239	Oryza punctata	58.09	0.00e+00	695.00
IUUC-Oru-085131	Oryza rufipogon	60.12	0.00e+00	706.00
IUUC-Osa-086189	Oryza sativa	66.36	0.00e+00	831.00
IUUC-Ola-086574	Oryzias latipes	45.71	6.00e-93	335.00
IUUC-Olu-087616	Ostreococcus lucimarinus	39.02	2.00e-127	449.00
IUUC-Psi-093598	Pelodiscus sinensis	37.67	2.00e-104	372.00
IUUC-Pma-094593	Petromyzon marinus	39.75	3.00e-58	219.00
IUUC-Pno-094823	Phaeosphaeria nodorum	33.69	3.00e-81	296.00
IUUC-Ppa-095455	Physcomitrella patens	56.49	0.00e+00	750.00
IUUC-Pfo-097120	Poecilia formosa	46.97	1.00e-94	340.00
IUUC-Pop-099542	Populus trichocarpa	74.44	0.00e+00	1008.00
IUUC-Pca-100727	Procavia capensis	41.53	1.00e-72	267.00
IUUC-Ppe-101686	Prunus persica	75.11	0.00e+00	1013.00
IUUC-Ptt-103995	Puccinia triticina	32.16	9.00e-72	265.00
IUUC-Sce-106186	Saccharomyces cerevisiae	35.44	5.00e-104	372.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	34.61	6.00e-110	390.00
IUUC-Spo-108142	Schizosaccharomyces pombe	35.04	3.00e-113	402.00
IUUC-Smo-109111	Selaginella moellendorffii	58.42	0.00e+00	723.00
IUUC-Sit-109804	Setaria italica	67.81	0.00e+00	872.00
IUUC-Sly-111693	Solanum lycopersicum	72.12	0.00e+00	953.00
IUUC-Sar-113381	Sorex araneus	42.23	4.00e-76	278.00
IUUC-Sbi-114849	Sorghum bicolor	67.27	0.00e+00	857.00
IUUC-Sre-114945	Sporisorium reilianum	38.31	4.00e-74	273.00
IUUC-Ssc-115582	Sus scrofa	45.41	2.00e-93	336.00
IUUC-Tru-118011	Takifugu rubripes	43.92	8.00e-93	334.00
IUUC-Tsy-119622	Tarsius syrichta	32.43	4.00e-48	185.00
IUUC-Tni-120598	Tetraodon nigroviridis	45.33	3.00e-92	332.00
IUUC-Tca-121247	Theobroma cacao	78.23	0.00e+00	1058.00
IUUC-Tre-121949	Trichoderma reesei	27.99	7.00e-80	291.00
IUUC-Tae-123335	Triticum aestivum	65.02	0.00e+00	800.00
IUUC-Tur-126005	Triticum urartu	58.86	0.00e+00	734.00
IUUC-Tme-126904	Tuber melanosporum	32.72	4.00e-110	391.00
IUUC-Vvi-131171	Vitis vinifera	74.48	0.00e+00	999.00
IUUC-Xma-133583	Xiphophorus maculatus	46.69	2.00e-93	336.00
IUUC-Yli-134446	Yarrowia lipolytica	40.16	3.00e-129	455.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence