iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017282

Ensembl Protein ID

Bra004446.1-P

UniProt Accession

M4CJR2; M4CJR2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004446	Bra004446.1	Bra004446.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-09	37.0	112	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  +d+ ++lp CgH+fh dC+  w       + + +CPlCr
   Q: 112  CSVCLSEFeeEDQGRLLPkCGHAFHVDCIDTW------FRSSSTCPLCR 154
           ********66444888889*************......9999******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGIAEESSKP MWGSISHASP GHALSGKIMI SSVIILSVAL IMIICFHSYA RWLFRRQNRR 60
IRRRIRAHLR ALSASTISSS SSLSPLDLAI LEKIPIFVYS SETHHQTPLE ECSVCLSEFE 120

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Nucleotide Sequence
(Fasta)

ATGGGAATCG CAGAAGAAAG CAGCAAGCCA ATGTGGGGGA GCATCAGCCA TGCGTCTCCA 60
GGCCACGCTC TTAGTGGCAA AATCATGATA TCCTCCGTGA TCATCCTCTC CGTCGCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007125	Arabidopsis thaliana	59.35	8.00e-59	219.00
IUUC-Bol-015580	Brassica oleracea	84.48	7.00e-80	289.00
IUUC-Hvu-047248	Hordeum vulgare	60.32	6.00e-18	83.60
IUUC-Oba-075668	Oryza barthii	48.48	4.00e-16	77.40
IUUC-Ogl-077667	Oryza glaberrima	48.48	4.00e-16	77.40
IUUC-Ogu-078518	Oryza glumaepatula	68.57	4.00e-12	63.50
IUUC-Ome-081971	Oryza meridionalis	54.10	7.00e-13	66.60
IUUC-Oni-082179	Oryza nivara	67.44	1.00e-14	73.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence