iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114194

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G416300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g042800	Sb02g042800.1	Sb02g042800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-09	37.8	103	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   +   ++lp CgH+fh++C+  w       + + +CPlCr
   Q: 103  CAVCLTEFgerE-AGRLLPgCGHAFHEQCIATW------LRVSTTCPLCR 145
           ********8643.3777888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGLQSLAAAG LVLLLLYLTG RFLWLYNKDA AQAEAAAASA SSPSSRRRRP ATAAGASTTS 60
LPAAASPPPR RAMPLSSSSS LLPVFFVLNV GVPAGPGAET AECAVCLTEF GEREAGRLLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCTGC AGAGCCTCGC GGCCGCCGGA CTCGTCCTGC TCCTGCTCTA CCTCACCGGC 60
CGCTTCCTCT GGCTCTACAA TAAGGACGCC GCTCAGGCAG AGGCAGCAGC CGCATCAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g042800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047248	Hordeum vulgare	74.55	1.00e-20	92.00
IUUC-Oba-075512	Oryza barthii	47.10	5.00e-22	95.90
IUUC-Obr-076378	Oryza brachyantha	74.51	1.00e-17	79.70
IUUC-Ogu-078451	Oryza glumaepatula	53.62	2.00e-22	97.10
IUUC-Olu-087723	Ostreococcus lucimarinus	45.45	7.00e-09	55.10
IUUC-Sre-115179	Sporisorium reilianum	52.94	4.00e-09	57.80
IUUC-Tae-124975	Triticum aestivum	83.67	6.00e-21	92.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence