iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111238

Ensembl Protein ID

Solyc06g034160.2.1

UniProt Accession

K4C4P0; K4C4P0_SOLLC

Protein Name

Autophagy-related protein 3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g034160.2	Solyc06g034160.2.1	Solyc06g034160.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E2/Autophagy_C	87.58	2.00e-165	578.00	IUUC-Ath-006802
E2/Autophagy_C	45.71	2.00e-66	249.00	IUUC-Hsa-046449
E2/Autophagy_C	32.30	3.00e-32	133.00	IUUC-Sce-106172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVLSQLHGAF KGTVERITSP RTVSAFKEKG VLSVSEFVIA GDNLVSKCPT WSWESGEPSK 60
RKSYLPADKQ FLITRNVPCL RRAASIEEEY EAAGGEVLLD NEDNDGWLAT HGKPKENNGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAATTCCTA GAAACCTAGA GATAGCATTA ATCATCCCAA ATCTAGAAGA AAGAAGCTCA 60
ACAGGTCGTC TTTTCTGTCA ACTCCGGGAA AGAGTAGAAA AGACGGAAGC TGTTGTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0833--Ubl conjugation pathway

Interpro

IPR007135--Autophagy-rel_prot_3
IPR019461--Autophagy-rel_prot_3_C
IPR007134--Autophagy-rel_prot_3_N

Pfam

PF03987--Autophagy_act_C
PF10381--Autophagy_C
PF03986--Autophagy_N

Gene Ontology

GO:0000153--C:cytoplasmic ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0019776--F:Atg8 ligase activity
GO:0000045--P:autophagosome assembly
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy
GO:0015031--P:protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001111	Aegilops tauschii	66.09	2.00e-100	357.00
IUUC-Aml-002081	Ailuropoda melanoleuca	44.97	2.00e-64	238.00
IUUC-Atr-002712	Amborella trichopoda	75.35	1.00e-113	401.00
IUUC-Apl-003956	Anas platyrhynchos	42.05	1.00e-49	189.00
IUUC-Aca-004578	Anolis carolinensis	44.83	2.00e-64	238.00
IUUC-Aly-005823	Arabidopsis lyrata	87.90	3.00e-161	560.00
IUUC-Ath-006802	Arabidopsis thaliana	87.58	1.00e-160	557.00
IUUC-Ago-007855	Ashbya gossypii	27.97	8.00e-28	116.00
IUUC-Acl-008147	Aspergillus clavatus	35.16	2.00e-28	119.00
IUUC-Afl-008483	Aspergillus flavus	35.93	2.00e-34	139.00
IUUC-Afu-008818	Aspergillus fumigatus	31.72	1.00e-37	149.00
IUUC-Ani-009481	Aspergillus nidulans	36.13	3.00e-32	131.00
IUUC-Ang-009800	Aspergillus niger	33.82	2.00e-40	158.00
IUUC-Aor-010150	Aspergillus oryzae	35.93	2.00e-34	139.00
IUUC-Ate-010545	Aspergillus terreus	51.32	8.00e-18	83.20
IUUC-Ame-011793	Astyanax mexicanus	45.94	2.00e-68	251.00
IUUC-Bgr-012167	Blumeria graminis	34.92	5.00e-30	124.00
IUUC-Bta-012695	Bos taurus	44.97	9.00e-65	239.00
IUUC-Bci-013972	Botrytis cinerea	41.96	2.00e-17	82.40
IUUC-Bdi-014756	Brachypodium distachyon	71.07	2.00e-120	424.00
IUUC-Bol-015091	Brassica oleracea	80.89	1.00e-137	481.00
IUUC-Bra-016662	Brassica rapa	82.17	8.00e-136	475.00
IUUC-Cel-018143	Caenorhabditis elegans	49.23	3.00e-32	131.00
IUUC-Cja-018991	Callithrix jacchus	46.25	7.00e-69	253.00
IUUC-Cfa-020070	Canis familiaris	44.69	8.00e-65	239.00
IUUC-Cpo-021860	Cavia porcellus	45.14	5.00e-65	240.00
IUUC-Cre-022948	Chlamydomonas reinhardtii	51.16	6.00e-78	283.00
IUUC-Csa-023881	Chlorocebus sabaeus	44.14	4.00e-65	240.00
IUUC-Cho-024852	Choloepus hoffmanni	44.13	5.00e-65	240.00
IUUC-Cin-025787	Ciona intestinalis	41.25	2.00e-62	231.00
IUUC-Csv-026369	Ciona savignyi	43.37	1.00e-61	228.00
IUUC-Cgl-026680	Colletotrichum gloeosporioides	46.67	1.00e-15	76.60
IUUC-Cne-026905	Cryptococcus neoformans	38.87	6.00e-43	167.00
IUUC-Dre-028811	Danio rerio	45.48	3.00e-66	244.00
IUUC-Dno-030081	Dasypus novemcinctus	45.89	1.00e-63	235.00
IUUC-Dor-030183	Dipodomys ordii	41.44	3.00e-20	91.70
IUUC-Dse-031539	Dothistroma septosporum	28.77	1.00e-06	47.00
IUUC-Dme-031805	Drosophila melanogaster	43.64	5.00e-62	230.00
IUUC-Ete-033171	Echinops telfairi	45.28	3.00e-64	237.00
IUUC-Eca-034083	Equus caballus	44.97	1.00e-64	239.00
IUUC-Eeu-034804	Erinaceus europaeus	44.65	2.00e-63	235.00
IUUC-Fca-036289	Felis catus	45.28	5.00e-65	240.00
IUUC-Fal-037060	Ficedula albicollis	46.67	9.00e-66	243.00
IUUC-Fox-038051	Fusarium oxysporum	33.93	4.00e-18	84.70
IUUC-Fso-038124	Fusarium solani	42.99	2.00e-17	82.80
IUUC-Gmo-039538	Gadus morhua	46.69	2.00e-68	251.00
IUUC-Ggr-039880	Gaeumannomyces graminis	36.75	1.00e-21	96.70
IUUC-Gga-041108	Gallus gallus	46.18	3.00e-65	241.00
IUUC-Gac-041558	Gasterosteus aculeatus	48.24	3.00e-69	254.00
IUUC-Gma-043969	Glycine max	84.98	8.00e-150	521.00
IUUC-Ggo-045071	Gorilla gorilla	43.83	3.00e-64	238.00
IUUC-Hsa-046449	Homo sapiens	43.83	3.00e-64	238.00
IUUC-Hvu-047451	Hordeum vulgare	69.81	1.00e-119	421.00
IUUC-Itr-048360	Ictidomys tridecemlineatus	44.83	8.00e-65	239.00
IUUC-Kpa-049096	Komagataella pastoris	33.23	2.00e-35	142.00
IUUC-Lch-049726	Latimeria chalumnae	46.15	1.00e-68	252.00
IUUC-Lpe-050734	Leersia perrieri	71.88	2.00e-111	394.00
IUUC-Loc-051983	Lepisosteus oculatus	46.03	3.00e-67	248.00
IUUC-Lma-053038	Leptosphaeria maculans	31.85	5.00e-32	130.00
IUUC-Laf-054510	Loxodonta africana	46.62	4.00e-64	237.00
IUUC-Mcc-054792	Macaca mulatta	44.14	4.00e-65	240.00
IUUC-Meu-055965	Macropus eugenii	44.27	2.00e-47	181.00
IUUC-Mor-057292	Magnaporthe oryzae	31.64	3.00e-30	125.00
IUUC-Mtr-058282	Medicago truncatula	84.35	5.00e-152	529.00
IUUC-Mla-059144	Melampsora laricipopulina	38.32	7.00e-46	177.00
IUUC-Mga-059509	Meleagris gallopavo	46.35	5.00e-65	240.00
IUUC-Mvi-060281	Microbotryum violaceum	61.18	1.00e-27	116.00
IUUC-Mmr-061788	Microcebus murinus	45.28	3.00e-65	241.00
IUUC-Mdo-062922	Monodelphis domestica	45.60	1.00e-63	236.00
IUUC-Mmu-064249	Mus musculus	45.60	7.00e-66	243.00
IUUC-Mac-064843	Musa acuminata	81.25	1.00e-144	504.00
IUUC-Mpu-065717	Mustela putorius furo	44.97	2.00e-64	238.00
IUUC-Mlu-067151	Myotis lucifugus	45.61	2.00e-60	224.00
IUUC-Nfi-068551	Neosartorya fischeri	31.18	2.00e-37	149.00
IUUC-Ncr-068846	Neurospora crassa	32.95	2.00e-31	129.00
IUUC-Nle-069790	Nomascus leucogenys	43.83	3.00e-64	238.00
IUUC-Ont-072517	Oreochromis niloticus	46.69	7.00e-67	246.00
IUUC-Oan-073285	Ornithorhynchus anatinus	58.28	3.00e-43	167.00
IUUC-Ocu-074695	Oryctolagus cuniculus	45.45	3.00e-65	241.00
IUUC-Oba-075515	Oryza barthii	72.64	1.00e-128	451.00
IUUC-Obr-076787	Oryza brachyantha	73.27	3.00e-128	450.00
IUUC-Ogl-077440	Oryza glaberrima	73.27	6.00e-129	452.00
IUUC-Ogu-078037	Oryza glumaepatula	73.19	8.00e-128	448.00
IUUC-Oin-079452	Oryza indica	73.19	6.00e-129	452.00
IUUC-Olo-080450	Oryza longistaminata	71.07	6.00e-123	432.00
IUUC-Ome-081514	Oryza meridionalis	72.96	1.00e-128	451.00
IUUC-Oni-082677	Oryza nivara	73.19	6.00e-129	452.00
IUUC-Opu-083925	Oryza punctata	71.38	4.00e-125	440.00
IUUC-Oru-084828	Oryza rufipogon	70.98	1.00e-122	432.00
IUUC-Osa-085937	Oryza sativa	72.87	2.00e-128	451.00
IUUC-Ola-086559	Oryzias latipes	40.00	4.00e-34	137.00
IUUC-Olu-087766	Ostreococcus lucimarinus	45.67	9.00e-72	262.00
IUUC-Oga-087983	Otolemur garnettii	44.20	4.00e-63	233.00
IUUC-Oar-089281	Ovis aries	45.28	9.00e-65	239.00
IUUC-Ptr-090983	Pan troglodytes	43.83	3.00e-64	238.00
IUUC-Pan-092457	Papio anubis	44.14	4.00e-65	240.00
IUUC-Psi-094046	Pelodiscus sinensis	47.44	2.00e-63	234.00
IUUC-Pno-094925	Phaeosphaeria nodorum	32.18	4.00e-30	124.00
IUUC-Ppa-095487	Physcomitrella patens	74.44	7.00e-126	442.00
IUUC-Pfo-096968	Poecilia formosa	46.67	2.00e-67	248.00
IUUC-Pab-098621	Pongo abelii	43.83	4.00e-63	233.00
IUUC-Pop-100007	Populus trichocarpa	88.29	2.00e-157	547.00
IUUC-Pca-100590	Procavia capensis	58.28	2.00e-43	168.00
IUUC-Ppe-101657	Prunus persica	84.71	1.00e-149	521.00
IUUC-Pva-102446	Pteropus vampyrus	44.65	3.00e-64	237.00
IUUC-Pgr-103604	Puccinia graminis	56.38	2.00e-25	109.00
IUUC-Ptt-103941	Puccinia triticina	58.82	2.00e-25	109.00
IUUC-Pte-104252	Pyrenophora teres	33.97	3.00e-34	138.00
IUUC-Pyt-104556	Pyrenophora triticirepentis	33.97	3.00e-34	138.00
IUUC-Rno-106025	Rattus norvegicus	45.45	2.00e-65	241.00
IUUC-Sce-106172	Saccharomyces cerevisiae	31.37	2.00e-28	119.00
IUUC-Sha-106858	Sarcophilus harrisii	45.08	1.00e-64	239.00
IUUC-Sja-107905	Schizosaccharomyces japonicus	49.14	4.00e-28	117.00
IUUC-Spo-108185	Schizosaccharomyces pombe	44.55	4.00e-19	87.40
IUUC-Smo-108883	Selaginella moellendorffii	69.48	5.00e-115	406.00
IUUC-Sit-110512	Setaria italica	69.38	7.00e-118	416.00
IUUC-Stu-112441	Solanum tuberosum	98.08	0.00e+00	639.00
IUUC-Sar-113039	Sorex araneus	58.28	3.00e-43	167.00
IUUC-Sbi-113776	Sorghum bicolor	69.40	3.00e-117	413.00
IUUC-Sre-115074	Sporisorium reilianum	44.25	4.00e-22	98.20
IUUC-Ssc-115262	Sus scrofa	44.97	1.00e-64	238.00
IUUC-Tgu-116790	Taeniopygia guttata	46.98	1.00e-65	242.00
IUUC-Tru-118160	Takifugu rubripes	46.03	1.00e-66	245.00
IUUC-Tsy-119145	Tarsius syrichta	33.02	7.00e-32	130.00
IUUC-Tni-119937	Tetraodon nigroviridis	43.17	2.00e-61	228.00
IUUC-Tca-121323	Theobroma cacao	88.50	5.00e-156	542.00
IUUC-Tre-121993	Trichoderma reesei	32.35	5.00e-16	77.80
IUUC-Tvi-122332	Trichoderma virens	32.94	6.00e-17	80.90
IUUC-Tae-123478	Triticum aestivum	69.21	1.00e-118	418.00
IUUC-Tur-126679	Triticum urartu	68.87	3.00e-118	417.00
IUUC-Tme-127159	Tuber melanosporum	34.29	8.00e-13	66.60
IUUC-Ttr-128261	Tursiops truncatus	47.30	1.00e-64	238.00
IUUC-Uma-129572	Ustilago maydis	31.50	1.00e-36	146.00
IUUC-Vda-129966	Verticillium dahliae	30.35	7.00e-34	137.00
IUUC-Vpa-130698	Vicugna pacos	40.32	5.00e-52	197.00
IUUC-Xtr-132878	Xenopus tropicalis	45.57	7.00e-67	246.00
IUUC-Xma-134017	Xiphophorus maculatus	46.98	5.00e-68	250.00
IUUC-Yli-134373	Yarrowia lipolytica	34.03	5.00e-16	77.80
IUUC-Zma-135222	Zea mays	65.70	2.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence