iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002916

Ensembl Protein ID

ERN17178

UniProt Accession

U5D9W9; U5D9W9_AMBTC

Genbank Protein ID

ERN17178.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392384

Gene Name

AMTR_s00044p00145170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00044p00145170	ERN17178	ERN17178

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-24	86.0	31	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           + f+Cp++++++rdPv++++G+t++r++Iekw++++        cP+t+++l+++dl+P+++lr++i++w ++n+
   Q: 31   DSFICPLTKQVFRDPVTIENGQTFEREAIEKWFRECIDtgrppICPLTSKELKSTDLKPSIALRNTIEEWTARNE 105
           78*******************************66665566699***************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAEVWEMNYD NGSQSDDSYH FERRHIEPPF DSFICPLTKQ VFRDPVTIEN GQTFEREAIE 60
KWFRECIDTG RPPICPLTSK ELKSTDLKPS IALRNTIEEW TARNEAVKLE IAASSLSPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG TTTGGGAGAT GAATTACGAC AATGGCAGTC AATCTGATGA CAGCTATCAT 60
TTTGAAAGAA GGCATATTGA ACCTCCTTTT GATTCTTTTA TTTGCCCTCT TACGAAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18445512

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	61.43	0.00e+00	965.00
IUUC-Aly-005480	Arabidopsis lyrata	57.39	0.00e+00	837.00
IUUC-Ath-007569	Arabidopsis thaliana	57.76	0.00e+00	842.00
IUUC-Bdi-014487	Brachypodium distachyon	60.07	0.00e+00	935.00
IUUC-Bol-016384	Brassica oleracea	56.16	0.00e+00	780.00
IUUC-Bra-017058	Brassica rapa	56.41	0.00e+00	805.00
IUUC-Gma-044318	Glycine max	67.94	0.00e+00	1100.00
IUUC-Hvu-047783	Hordeum vulgare	61.30	0.00e+00	970.00
IUUC-Lpe-050971	Leersia perrieri	60.93	0.00e+00	920.00
IUUC-Mtr-058511	Medicago truncatula	66.22	0.00e+00	1053.00
IUUC-Mac-064911	Musa acuminata	59.46	0.00e+00	915.00
IUUC-Oba-075225	Oryza barthii	61.18	0.00e+00	956.00
IUUC-Obr-076103	Oryza brachyantha	60.93	0.00e+00	918.00
IUUC-Ogl-077529	Oryza glaberrima	61.18	0.00e+00	954.00
IUUC-Ogu-078735	Oryza glumaepatula	61.06	0.00e+00	953.00
IUUC-Oin-079422	Oryza indica	61.30	0.00e+00	946.00
IUUC-Olo-080644	Oryza longistaminata	55.90	0.00e+00	840.00
IUUC-Ome-081455	Oryza meridionalis	60.93	0.00e+00	953.00
IUUC-Oni-082690	Oryza nivara	61.30	0.00e+00	946.00
IUUC-Opu-083157	Oryza punctata	61.30	0.00e+00	954.00
IUUC-Oru-085058	Oryza rufipogon	61.30	0.00e+00	946.00
IUUC-Osa-086000	Oryza sativa	61.30	0.00e+00	946.00
IUUC-Ppa-096021	Physcomitrella patens	50.00	0.00e+00	747.00
IUUC-Pop-099966	Populus trichocarpa	67.57	0.00e+00	1067.00
IUUC-Ppe-101973	Prunus persica	66.83	0.00e+00	1069.00
IUUC-Smo-109219	Selaginella moellendorffii	51.05	0.00e+00	724.00
IUUC-Sit-110490	Setaria italica	61.67	0.00e+00	961.00
IUUC-Sly-111702	Solanum lycopersicum	65.85	0.00e+00	955.00
IUUC-Stu-111962	Solanum tuberosum	65.85	0.00e+00	1034.00
IUUC-Sbi-113974	Sorghum bicolor	53.59	0.00e+00	776.00
IUUC-Tca-121113	Theobroma cacao	68.43	0.00e+00	1092.00
IUUC-Tae-125341	Triticum aestivum	54.85	0.00e+00	768.00
IUUC-Tur-126573	Triticum urartu	61.06	0.00e+00	960.00
IUUC-Vvi-131623	Vitis vinifera	69.04	0.00e+00	1123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence