iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-042940

Ensembl Protein ID

GLYMA20G38230.1

UniProt Accession

I1NJ39; I1NJ39_SOYBN

Genbank Protein ID

KRG92932.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853

Gene Name

LOC100793575; GLYMA_20G238400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G38230	GLYMA20G38230.1	GLYMA20G38230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-27	95.8	452	484
UBD/Beta-Prp	2.80e-42	146.5	404	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H ++v++l+f  ++  + +v+++dD+ ikvWDl
   Q: 452  HVGGVNDLSFahPNkQMcIVTCGDDKLIKVWDL 484
           999*********7654459*************7 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrsl..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgh 93
           +k++++sv + v++spd+s++  +++ + i ++ +t ++   +++    h ++v++++f +  k   +vt+++D++ikvwdl+ +k + +++gh
   Q: 404  VKDAPISVSR-VTWSPDGSFVGIAFTKHLIHLYAYTGPNElTQRIevDAHVGGVNDLSFAHPNKqmCIVTCGDDKLIKVWDLNGRKLF-SFEGH 495
           5666776666.999**********************9987434444589**********9988889****************988876.79*** PP
   S: 94   edsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr....tvrlWdlktgkllrtltgghtd 181
           e+ v+s+  +   + +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg  l+s+++ +    ++  W+ + g + rt  g  ++
   Q: 496  EAPVYSICPHHkeNIQFIFSTAIDGKIKAWLYDNMGSRVDYDAP-GHWCTTMLYSADGTRLFSCGTSKdgesFLVEWNESEGAIKRTYNGFRKK 588
           ******988776666***************99887777755555.559999999999999999876441122444577799*********99** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           s   ++fd ++++++++++dg+vk+wd+ + +        g  +   ++rf +++++l++++ D+  +i 
   Q: 589  STGVVQFDTTQNRFLAAGEDGQVKFWDMDNINLliSSDADGGLQSLPRLRFNKEGNILAVTTVDNGFKIL 658
           ****************************955541155556666788889999999999999999888774 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTSLSRELVF LILQFLEEEK FKESVHKLEK ESGFFFNMKY FEEKVQAGEW EEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDQQDK AKAVEILVGD LKMFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAACACT CCTTAGAGTG TTCTTATCAA GCACCAAGTG ATACGTTCAC GGGATAAGAT 60
TGTGCTTATC GCATAAGTGA ATGTGCTTAT GTCTGATGGG TCAGTAGAAA AAGAGCCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

gmx:100793575

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005503	Arabidopsis lyrata	72.23	0.00e+00	1650.00
IUUC-Ath-007641	Arabidopsis thaliana	73.81	0.00e+00	1719.00
IUUC-Bdi-014677	Brachypodium distachyon	72.70	0.00e+00	1652.00
IUUC-Bol-016367	Brassica oleracea	74.58	0.00e+00	1723.00
IUUC-Bra-017100	Brassica rapa	72.55	0.00e+00	1694.00
IUUC-Hvu-047370	Hordeum vulgare	72.30	0.00e+00	1676.00
IUUC-Lpe-050951	Leersia perrieri	72.21	0.00e+00	1612.00
IUUC-Mtr-058168	Medicago truncatula	91.15	0.00e+00	2125.00
IUUC-Mac-064660	Musa acuminata	71.82	0.00e+00	1635.00
IUUC-Oba-075415	Oryza barthii	73.64	0.00e+00	1696.00
IUUC-Obr-076726	Oryza brachyantha	73.64	0.00e+00	1708.00
IUUC-Ogl-077810	Oryza glaberrima	73.64	0.00e+00	1696.00
IUUC-Ogu-078090	Oryza glumaepatula	73.64	0.00e+00	1696.00
IUUC-Oin-080158	Oryza indica	73.44	0.00e+00	1691.00
IUUC-Olo-080271	Oryza longistaminata	72.42	0.00e+00	1652.00
IUUC-Ome-081965	Oryza meridionalis	73.75	0.00e+00	1686.00
IUUC-Oni-082421	Oryza nivara	73.56	0.00e+00	1695.00
IUUC-Opu-083912	Oryza punctata	73.38	0.00e+00	1691.00
IUUC-Oru-085201	Oryza rufipogon	73.64	0.00e+00	1696.00
IUUC-Osa-086161	Oryza sativa	73.64	0.00e+00	1696.00
IUUC-Pop-099268	Populus trichocarpa	83.22	0.00e+00	1864.00
IUUC-Ppe-102061	Prunus persica	83.23	0.00e+00	1900.00
IUUC-Sit-110487	Setaria italica	73.75	0.00e+00	1665.00
IUUC-Sly-111169	Solanum lycopersicum	84.54	0.00e+00	1909.00
IUUC-Stu-112369	Solanum tuberosum	84.19	0.00e+00	1904.00
IUUC-Sbi-113873	Sorghum bicolor	73.67	0.00e+00	1680.00
IUUC-Tca-121768	Theobroma cacao	84.47	0.00e+00	1963.00
IUUC-Tae-125707	Triticum aestivum	72.39	0.00e+00	1665.00
IUUC-Tur-126477	Triticum urartu	68.57	0.00e+00	1633.00
IUUC-Vvi-131297	Vitis vinifera	82.79	0.00e+00	1920.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence