iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015897

Ensembl Protein ID

Bo1g040220.1

UniProt Accession

A0A0D3A6B4; A0A0D3A6B4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g040220	Bo1g040220.1	Bo1g040220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-22	79.6	136	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  vt++a+ s+ + l ++s D t+++WD  +g ++
   Q: 136  GHQKVVTGIALpSGsDKLYTASKDETLRIWDCASGQCT 173
           89*********966799***************999986 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MDLDMNGGDK RVFQRLGGAS NQKVCFHWRA GRCNRYPCPF LHRESPPPAP FPGSSSSTNN 60
KRIADDDSGF AGSSHRRGPG SGNNTWGRFG GNRTVTKTEK LCKFWADGNC PYGDKCKYLH 120

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Nucleotide Sequence
(Fasta)

ATGGATTTAG ATATGAACGG AGGAGACAAG AGAGTCTTCC AAAGACTCGG TGGCGCCTCC 60
AACCAGAAGG TCTGTTTCCA CTGGCGAGCC GGCCGCTGCA ACCGCTACCC TTGCCCTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006378	Arabidopsis lyrata	88.10	0.00e+00	637.00
IUUC-Hvu-047824	Hordeum vulgare	58.26	4.00e-115	407.00
IUUC-Osa-085619	Oryza sativa	54.90	2.00e-103	368.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence