iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017351

Ensembl Protein ID

Bra029149.1-P

UniProt Accession

M4EK32; M4EK32_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra029149	Bra029149.1	Bra029149.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-28	97.9	149	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v+++a+ s+ + l +Gs Dgti+vWD  +g ++
   Q: 149  GHEKLVSGIALpSGsDKLYTGSKDGTIRVWDCASGQCT 186
           899********966799****************99997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDFDSNGGNK RVFNRLGGPT RPSPQQTNTR QQVCFHWRAG RCYRNPCQFL HRELPAGPVP 60
NHANKRAPDE SGFAGPSHRR GPGFNGSHSS NNNNNTWGRF GGNSRAVVTK TEKVCRFWVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTCG ATTCGAACGG AGGAAACAAA CGAGTCTTCA ACCGACTCGG CGGGCCAACT 60
CGCCCCTCGC CGCAGCAAAC CAACACGCGT CAGCAAGTCT GCTTCCACTG GCGAGCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	42.02	4.00e-69	254.00
IUUC-Ath-007001	Arabidopsis thaliana	83.52	0.00e+00	742.00
IUUC-Bdi-014857	Brachypodium distachyon	60.05	4.00e-152	530.00
IUUC-Bol-016382	Brassica oleracea	96.74	0.00e+00	844.00
IUUC-Hvu-047824	Hordeum vulgare	56.91	4.00e-116	410.00
IUUC-Lpe-051596	Leersia perrieri	52.79	2.00e-123	435.00
IUUC-Mtr-058068	Medicago truncatula	62.90	1.00e-152	532.00
IUUC-Oba-075769	Oryza barthii	52.20	2.00e-123	435.00
IUUC-Obr-076011	Oryza brachyantha	58.89	9.00e-151	526.00
IUUC-Ogu-078248	Oryza glumaepatula	51.72	9.00e-126	442.00
IUUC-Oin-079981	Oryza indica	59.54	8.00e-152	529.00
IUUC-Olo-080571	Oryza longistaminata	51.80	8.00e-116	410.00
IUUC-Ome-081598	Oryza meridionalis	52.18	2.00e-125	441.00
IUUC-Oni-082711	Oryza nivara	52.41	9.00e-126	442.00
IUUC-Opu-083451	Oryza punctata	56.67	3.00e-147	514.00
IUUC-Oru-085129	Oryza rufipogon	52.20	4.00e-123	434.00
IUUC-Osa-085619	Oryza sativa	55.36	3.00e-106	377.00
IUUC-Ppa-096012	Physcomitrella patens	54.60	9.00e-109	386.00
IUUC-Smo-108900	Selaginella moellendorffii	47.15	6.00e-100	357.00
IUUC-Sit-109731	Setaria italica	57.63	6.00e-142	496.00
IUUC-Sbi-114748	Sorghum bicolor	59.08	1.00e-147	516.00
IUUC-Tae-125577	Triticum aestivum	60.56	2.00e-151	528.00
IUUC-Tur-126095	Triticum urartu	53.49	4.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence